Gene Dfer_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0318 
Symbol 
ID8223884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp362281 
End bp363399 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content53% 
IMG OID644928196 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003084753 
Protein GI255034132 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.154893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAA CGCCAATTCC AAAGCCCATT CGCAAAATCA TCCACATTGA TATGGATGCA 
TTTTACGCGT CGGTGGAACA GCGCGATTTC CCCGAATACC GCGGCAAGCC GCTGGCCGTG
GGCGGTTCTC CAACCGGCCG GGGCGTGGTG GCAACGGCCA GTTACGAGGC ACGGAAGTTT
GGGGTGCGCT CGGCGATGCC CTCGCGGCAG GCCATTCAGC TTTGTCCGCA GATCATATTC
GTGCATCCGC GGTTCGAGGT TTATAAATCA GTTTCAAGAA GCATTCGGGA GATTTTTTCT
CGCTATACCG ATCTCATAGA ACCTTTATCG CTCGACGAGG CCTATCTCGA TGTTACAGAA
GACAAAATGG GCATTGGCTC GGCAATGGAG ATCGCGAAGC AGATCAAGCA GGCCATTCAG
GAAGAGCTGC ACCTGACCGC CTCGGCGGGC GTGTCGGTCA ATAAGTTTGT TGCCAAAATC
GCTTCCGATA TTCATAAGCC CAACGGGCTC ACATTCATTG GCCCTTCCAA AATAGAGCGC
TTCATGGACC AGTTGCCGGT TGAGAAGTTT CACGGCGTAG GCAAGGTAAC CGCCGATAAA
ATGAAGGGAA TGCAGCTTTT TACGGGTTCA GATCTCAAAA AACTGACGGA GGAAGAGCTG
GTAAACCATT TTGGAAAGAC GGGCCATTTC TACTACCGCA TCGTGCGCGG GATCGACGAC
CGGGAAGTGC AAACGCACCG CGAAACCAAG TCGCTCGGTG CCGAGGATAC ATTTACCTAC
GACCTCACCA CGCCCGACGA AATGAACAAG GAGCTCGACC GGATCGGCGT AACGGTGGCG
AACAGGCTGG AAACGAAAAA GTTGAAAGGC CGCACTGTGA CATTGAAAGT CAAGTTCAGC
GATTTTACCC AAATCACCCG TAACCATTCC TTTGCCCATC CCGTCGGCGA CCTCGATACC
ATCACCGACA CGGCAAAACA GCTCCTCGAA AAGCTTGATC TTGAAGGGAA AGCGGTGCGG
CTGCTGGGGA TCTCATTGTC CAACTTCCAC GAACCGGAAG TGAAATACCG CAAATACAAA
GACCCCGAAC AGCTCGAACT GTTCCCCTTC GGCTCATAG
 
Protein sequence
MQETPIPKPI RKIIHIDMDA FYASVEQRDF PEYRGKPLAV GGSPTGRGVV ATASYEARKF 
GVRSAMPSRQ AIQLCPQIIF VHPRFEVYKS VSRSIREIFS RYTDLIEPLS LDEAYLDVTE
DKMGIGSAME IAKQIKQAIQ EELHLTASAG VSVNKFVAKI ASDIHKPNGL TFIGPSKIER
FMDQLPVEKF HGVGKVTADK MKGMQLFTGS DLKKLTEEEL VNHFGKTGHF YYRIVRGIDD
REVQTHRETK SLGAEDTFTY DLTTPDEMNK ELDRIGVTVA NRLETKKLKG RTVTLKVKFS
DFTQITRNHS FAHPVGDLDT ITDTAKQLLE KLDLEGKAVR LLGISLSNFH EPEVKYRKYK
DPEQLELFPF GS