Gene Dfer_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0307 
Symbol 
ID8223873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp348835 
End bp349560 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content52% 
IMG OID644928185 
Productputative esterase 
Protein accessionYP_003084742 
Protein GI255034121 
COG category[S] Function unknown 
COG ID[COG4947] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.525567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.268113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGGG CGTATCACAA ATGGTTTAGT CCGGCTTTGG ACAGGTTTAT GGAAATGCTT 
GTTTTTGGTC ACGCGGGCAT GCCGGTGATA TTTTTCCCGA CGCGCTCGGC GCATTTCTAC
GACTTCGAGA ACTGGCGGGT GATTGATGCG ATGAAGCACA AGATCGAAGC CGGTGAAATC
CAGGTTTACT GCGTCGACAG CATTGATAGC GAAAGCTTCT ATTCCGAAGC GCCGCCGCCG
CATCGGATTG CGAGGCACAT TCGGTACGAA AAGTACATTC TGGAAGAGGT GATCCCGTTT
ATCCGCATTC AAAATAAGAG CCGGGAGCTC GTAGCAGCGG GTTGCAGCCT GGGCGGCTAT
CACGCGGTCA ACATTGCATT GAAGCATCCG GAAATGTTCA CCAAAGTGGT AGGCATGAGC
GCCCGCTACG ACCTTACCCA GCCGCTCCCC TACTTCGCCG ACCTGTTTGA CGGGTATTTC
GACGAGGACA TTTATTTCAA CATGCCTAAT CACTTCGTCC CGGGCATTTC GGACCCGGAG
CTTTTAAAAC GGCTGCGAGA ACTTGAAATC ACACTTGTAA TTGGCCGAGA GGATTCTTTT
CTGGAAAACA ACCGCCACCT CAGCGATTCG CTGCACCGGA TTGACGTCCC GCATCAGTTT
TACATCTGGG AAGAGGAAGC GCACCGGCCA CGATATTGGC GGGAGATGGT GAAGATTTAT
TTGTAA
 
Protein sequence
MERAYHKWFS PALDRFMEML VFGHAGMPVI FFPTRSAHFY DFENWRVIDA MKHKIEAGEI 
QVYCVDSIDS ESFYSEAPPP HRIARHIRYE KYILEEVIPF IRIQNKSREL VAAGCSLGGY
HAVNIALKHP EMFTKVVGMS ARYDLTQPLP YFADLFDGYF DEDIYFNMPN HFVPGISDPE
LLKRLRELEI TLVIGREDSF LENNRHLSDS LHRIDVPHQF YIWEEEAHRP RYWREMVKIY
L