Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0277 |
Symbol | |
ID | 8223843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 314213 |
End bp | 315121 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644928155 |
Product | protein of unknown function UPF0187 |
Protein accession | YP_003084712 |
Protein GI | 255034091 |
COG category | [S] Function unknown |
COG ID | [COG3781] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.162073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCTCA AAAAGAATAT CCCGATCCGC TACATCTTCG GTAAGATCAA GTACGAGGTC ATGTTTGTGA CCGTCTACGG TATCGCTATC GAGGTCATTT ACCAGAATTA CCATATTACC AACATTTCGA TCCCGATGAC GGTGCACAGC GTGCTCGGTA CGATCATTTC GTTGCTCCTT GCATTCCGTT CCAATCAGGC CTACGACCGT TGGTGGGAAG CCCGGATCAT TTGGGGTGCC ATCGTAAACG ACTCGCGGAC ATTCGCGCGG CAGATCCTTT CGCTCATGGA AGACCCGCTC GATCCCGACC GTATCGACGG TTTCAAGAAG CGGATGATCA AGCGCCAGAT CGCCTGGTGT TACGCATTGG GCAAAGGCCT GCGCCGCGAC GACCCGATGC CGATGATCAG CAAGTTTGTG TCCGAAGAAG AAATGGAATA CCTGAAAGAC TTCGACAACA AGCACGTTGG CCTGGTGCAG CTGCACGCCC GTGACCTGAA CAATGCATTG AAACAAGGCT GGCTGAACCC CTACCAGCAG GTAGAGCTCG ACCAGACGCT GACGCGCCTG TGCGATCACA TGGGTAAGTC GGAACGGATC AAAAACACCG TTTTCCCTTC GACTTACAGC CTTTACATTC ATCTGGCATT GCACTTCTTT ATCCTCTTGC TGCCGTTCGG GCTGGTTCAG CTGTTCGGTT TCCTGATGGT GCCGGTGCTG GTGGTGATCA CGGCATGTTT CTTCCTGATC GAGAAAATGG CGATCCATTT GCAGGACCCG TTCGAAAACA AGCCTACCGA CACGCCTGTG CTGTCGATCT CGAGGAATAT CGAGCGTGAT TTGAAACAAA TGATGAAAGA CAAGCACGTT CCCCAGGCAT TTCAGCCCGA AACGTTCTAC ATTTTGTAG
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Protein sequence | MLLKKNIPIR YIFGKIKYEV MFVTVYGIAI EVIYQNYHIT NISIPMTVHS VLGTIISLLL AFRSNQAYDR WWEARIIWGA IVNDSRTFAR QILSLMEDPL DPDRIDGFKK RMIKRQIAWC YALGKGLRRD DPMPMISKFV SEEEMEYLKD FDNKHVGLVQ LHARDLNNAL KQGWLNPYQQ VELDQTLTRL CDHMGKSERI KNTVFPSTYS LYIHLALHFF ILLLPFGLVQ LFGFLMVPVL VVITACFFLI EKMAIHLQDP FENKPTDTPV LSISRNIERD LKQMMKDKHV PQAFQPETFY IL
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