Gene Dfer_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0249 
Symbol 
ID8223815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp280164 
End bp281354 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content49% 
IMG OID644928128 
Productglycosyl transferase family 4 
Protein accessionYP_003084685 
Protein GI255034064 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTAC AACTACCTCT TCAGATACTA ACCGAAGGAA ACGTCAATAC GCTTGTCCAC 
CATGACATCT ATCAATGCCT CCTCTCGTTT TTGATCGCAT GTTTTTTGTC TATCATCTCG
ATCCCCATCA TCATTAACCT GTCGAACCTG CTGCATCTGA CGGCCAAGCC CGGTTTCAGA
AGTTCGCATG AGACGGAAAC TCCTACATTG GGCGGCATCG CGATATTCGC GGCTACGCTC
ATTTCCTATT TCCTGTGGCC GCATTCAGAA AACATCCTGG ACTCGAACCT GATCAGCCTC
GCAATGACCG GCGTGATCAT CCTGTTCTTT TTGGGGATTA AAGACGATAT CCTGGCCGTA
GACCCCACGA AGAAGCTCAT TATCCAGATT TTTGCGTCGC TGATCCTCGT GGCGATGGGC
AATTTCAAGG TCGATAATTT CTACGGCATA TTCGGCATTC ACGGCGTTTC GGACTTCATC
AGCATTCCGC TTACCGTTTT CATCTTCATC GCGATCATCA ACGCGATCAA CCTCATCGAC
GGGATCGACG GCCTCGCGGG CGGGATAAGC CTCATTGCCG GACTAGGTTT CGGTATCTGG
TTCATCGCCA ACGACCATTT CTCGTTTGGC TGCCTTGCAT TCGCGATGTC GGGCTCGCTG
CTGGGTTTTC TGCGTTTTAA TTTTTCCAAA ACCAGCAAAA TCTTCATGGG CGACACCGGT
TCGCTGATCG TCGGATATTT ACTATCAATA TTCTCGGTTG AGTTCCTTTC GCTCAACGTC
GGTTACCTGC ACGATCCGAA TGCTTACTTC AATGCACCGA TCATCGTGAT GGTACTGCTC
ATCGTCCCAA TTTTCGACAC GCTTCGCGTA TTCATCGTCC GCATTTTCAA GGGTGGTTCG
CCCTTCGTCG CCGACCGCAA CCACATGCAC CACATCCTGA TCGACAACGG CCTGAACCAT
TTCTGGGCGT CGTTTACCCT ATGGATGGTG ACGATCATCA ATACCACGCT CTTCTTTACA
TTCCACGGCG ACATTACCAA CACCGCTTCG TTCTACATTT ACATTGGAAT GTTCGGTTTA
TACATGGTAT TTGCCTATTT TCTCAAAAAG CGCGTTGCTT CGGTGAAGGC CCGGAAAAAA
TTGGTTAAGA GCCCTTCGTT CACCGACGAT GACCTTTCCA CGTTCCAGTA A
 
Protein sequence
MELQLPLQIL TEGNVNTLVH HDIYQCLLSF LIACFLSIIS IPIIINLSNL LHLTAKPGFR 
SSHETETPTL GGIAIFAATL ISYFLWPHSE NILDSNLISL AMTGVIILFF LGIKDDILAV
DPTKKLIIQI FASLILVAMG NFKVDNFYGI FGIHGVSDFI SIPLTVFIFI AIINAINLID
GIDGLAGGIS LIAGLGFGIW FIANDHFSFG CLAFAMSGSL LGFLRFNFSK TSKIFMGDTG
SLIVGYLLSI FSVEFLSLNV GYLHDPNAYF NAPIIVMVLL IVPIFDTLRV FIVRIFKGGS
PFVADRNHMH HILIDNGLNH FWASFTLWMV TIINTTLFFT FHGDITNTAS FYIYIGMFGL
YMVFAYFLKK RVASVKARKK LVKSPSFTDD DLSTFQ