| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0202 |
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| Symbol | |
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| ID | 8223768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 227875 |
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| End bp | 229647 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928081 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003084638 |
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| Protein GI | 255034017 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.940477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.073291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACTG AAACTTTTCA AACTTTCGAA GAGCTTGGAC TCAACGAAAA CATCCTGAAA
GCCTTGCAAG AAATGGGTTT TGAAAAACCC TCACCGATAC AGGCACAGGG AATCCCGGCA
GTTTTGCAGG GCTCTGACGT AATTGGTCAG GCTCAAACCG GTACCGGTAA AACTGCGGCA
TTCGGTATTC CCGTGCTGGA AAGAATAGAT ACATCCAGTA ATGCAGTACA AGCCCTGATC
CTCTGCCCTA CCCGCGAACT CGCGGTGCAG GTTTCGGAAG AACTCGGCCG TCTGTCCAAA
TTTATGCGTG GCGTGCGCAT CGAAGCCATC TACGGTGGTG ACTCGATCGA CCGTCAGATC
CGCTCCCTGA AAAAAGGTGT ACACATCGTT GTAGGAACTC CGGGCCGTGT AATGGACCAC
ATGGAGCGCC GCACCCTGAA ATTCGACGAA GTACGCATGA TGGTACTCGA TGAGGCTGAC
GAAATGCTCG ATATGGGCTT CCGTGAGGAC ATCGAGAGCA TCCTGGCCGA CATGCCGGAA
GATCGCCAGA CGATCCTTTT CTCGGCAACC ATGTCGAAGC CGATCATGTC GATCACCAAG
CGCTTTTTGA ACGACCCTAC CTTAATTAAG GTAGTTCGCA ACGAGCTGAC CAACCAGAAT
ATCGAGCAGG TTTACTTTGA AGTAAAACCA CAGGCGAAAG TCGAAGTAAT GACCCGGCTG
ATCGATATGC ACCACATTAA GTCCCTGCTG GTTTTTTGTA ATACCAAACG CAAGGTGGAC
GAGATTGTGG AAGACCTGCA ATTGCGTGGT TACGCTTCGG AAGGTATCCA CGGAGACCTC
CGCCAGCAGC AGCGCAGCAA TGTTATGAGC AAATTCAAGG CGGGTGTTAC TACTATCCTG
GTTGCTACTG ACGTTGCAGC ACGCGGTATC GACGTAAGCG GACTGGATGG CGTGATCAAC
TACGACATTC CGATGGACGA AGAATATTAC GTACACCGGA TCGGCCGTAC GGGGCGTGCG
GGAATGTCGG GTAAGGCGTT CTCACTCGTT GCCCGTGACG AAAAATACCG TCTGAAATCC
ATTGAAAGCT ATACCAAGGT TAAAATCGAG AAAGGGGTAA TTCCTTCATT CGAAGATATC
GTAGGTGTTC GTAAGGCACG TTTTGTGGAG AATATTTCAA ACTCCATCAA AGAAAGCAAC
GACGAAGAAC TGTACAACGA CGTACTTGAA ATGCTGCACC ACAGCGGTTT CTCAACCGAG
CAAATCGTAG GCGCAATGGC GAAGCAGATC ATGGGCGTTC AGAAAAACGA ATACTCCGAC
AGCAACCTCG CATGGGAAGA GCGTCGCAGC GAACGTCGCG AAGGCGGTAA CGACCGCTTC
GGTCGTGGCG AACGTCGTGA AGGCGGCCGT TTCGGTGATC GTCGCGAAGG CGGAAGCCGT
TTCGGCAGTG ACCGCGGAGG CGACCGTTAT GCACCGCGTG GCGAGCGTGG CGACAGAGGT
GGTGACCGCG GAGAGCGCCG TCAGTCGGCC CCCGAAGCTG GTATGACCCG CTTGTTCCTG
AGCTTGGGCC GTAAAGACCA CATCATGCCG AAAGACATCG TGGGTGCTAT TGCCGGCGAA
GCCAACATTC CGGGCAAAAC CATCGGTGCG ATCGACATTT ACGACAAATT CACTTTCGTA
GACGTACCTG AGCGCGATGC ACGCGCGGTA TTGCGTGCGA TGGATGGCAA CACCATCAAA
GGCAAGCCGG TGCAGATCGA CATTGCAAAA TAA
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| Protein sequence | MTTETFQTFE ELGLNENILK ALQEMGFEKP SPIQAQGIPA VLQGSDVIGQ AQTGTGKTAA
FGIPVLERID TSSNAVQALI LCPTRELAVQ VSEELGRLSK FMRGVRIEAI YGGDSIDRQI
RSLKKGVHIV VGTPGRVMDH MERRTLKFDE VRMMVLDEAD EMLDMGFRED IESILADMPE
DRQTILFSAT MSKPIMSITK RFLNDPTLIK VVRNELTNQN IEQVYFEVKP QAKVEVMTRL
IDMHHIKSLL VFCNTKRKVD EIVEDLQLRG YASEGIHGDL RQQQRSNVMS KFKAGVTTIL
VATDVAARGI DVSGLDGVIN YDIPMDEEYY VHRIGRTGRA GMSGKAFSLV ARDEKYRLKS
IESYTKVKIE KGVIPSFEDI VGVRKARFVE NISNSIKESN DEELYNDVLE MLHHSGFSTE
QIVGAMAKQI MGVQKNEYSD SNLAWEERRS ERREGGNDRF GRGERREGGR FGDRREGGSR
FGSDRGGDRY APRGERGDRG GDRGERRQSA PEAGMTRLFL SLGRKDHIMP KDIVGAIAGE
ANIPGKTIGA IDIYDKFTFV DVPERDARAV LRAMDGNTIK GKPVQIDIAK
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