| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0193 |
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| Symbol | |
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| ID | 8223759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 220108 |
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| End bp | 221082 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644928072 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003084629 |
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| Protein GI | 255034008 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00680352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.581709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGCTTGCATT TGCATTACTA AACCTCTTTT GTTACGCATC CTTCGCACAA
GCCCAGAAAA CTTCCGGCAA CCCGGTGTTC CCCGGATGGT ATGCCGATCC CGAGGGAATC
ATCTTTAACA AAACATTTTG GATTTACCCC ACATTCTCGG CCCCTTACAA CAAACAGGTC
CATATGGATG CATTCTCGTC CAAAGACCTC GTGACCTGGA ACAAACATCC CAACATCATC
GACACTTCGG CCGTAAAATG GGCTAAGCGG GCCATGTGGG CGCCTTCCAT CATCGAAAAA
GATAAGAAAT ACTACCTCTT CTTCGGCGCC AACGACATTC AGAACGACAA TGAAAAAGGC
GGTATAGGCG TGGCCGTCGC CGATCGTCCC GAAGGCCCAT TCAAGGATTA CCTGGGCAAA
CCGCTCATCG ACAAGTTCCA CAACGGCGCG CAGCCGATCG ACCAGTTTGT GTTCAAGGAC
AAAGACGGCC AATATTACCT TTTCTATGGC GGCTGGCGGC ATTGCAATGT GGCCAAGCTA
AAAAGCGACT TCACCGGCTT TGTTCCGTTC GAAGATGGTA CTATATTCAG GGAAATTACG
CCGAAAGGCT ATGTGGAAGG CCCGTTCATG TTTATCCGCA ATGGTAAGTA CTATTTCATG
TGGTCGGAAG GCGGCTGGAC AGGACCGGAT TATTCCGTGG CCTATGCCAT CTCCGATTCG
CCTTTCGGGC CTTTCGAACG AGTAGATAAA ATTTTGCAGC AAGATCCCAA AGTGGCTACC
GGTGCCGGTC ACCATTCGGT AATACAGGTT CCGGGCAAAG ACGAATGGTA CATCGTTTAC
CACCGCCGCC CTTTGACAGA AACCGATGGC AACCACCGGG AAACTTGCAT TGACGTAATG
TCTTTCGACG ACAAAGGACT GATCAACCCC GTGAAAATAA CGCGGGAGGG CGTCAAGCCT
GTCCGGTTAA AATAA
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| Protein sequence | MKKLLAFALL NLFCYASFAQ AQKTSGNPVF PGWYADPEGI IFNKTFWIYP TFSAPYNKQV
HMDAFSSKDL VTWNKHPNII DTSAVKWAKR AMWAPSIIEK DKKYYLFFGA NDIQNDNEKG
GIGVAVADRP EGPFKDYLGK PLIDKFHNGA QPIDQFVFKD KDGQYYLFYG GWRHCNVAKL
KSDFTGFVPF EDGTIFREIT PKGYVEGPFM FIRNGKYYFM WSEGGWTGPD YSVAYAISDS
PFGPFERVDK ILQQDPKVAT GAGHHSVIQV PGKDEWYIVY HRRPLTETDG NHRETCIDVM
SFDDKGLINP VKITREGVKP VRLK
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