| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0163 |
|---|
| Symbol | |
|---|
| ID | 8223729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 188329 |
|---|
| End bp | 188946 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644928042 |
|---|
| Product | putative acetyl transferase |
|---|
| Protein accession | YP_003084599 |
|---|
| Protein GI | 255033978 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.266694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTAT CCGACCAAAT CCGGAACAGT CCGGGGCTGA AAAAATTTGT CCATTGGATG
CTGATCCCGA CCAATCAGGC GCGCCCGAGG CTCTGGGTCC GGATATTTTT GAACCGCTTC
TTCCATAAAA GGGGTAAAAA TGTGATCATC CGCCGGTGGG TACGCATGGA TGTACTCCCG
TTCAATCCCT TTTCGATCGG CGACAATTCC ATGATCGAGG ATTTCAGTAC AATTAACAAT
GGCGTGGGGG CAGTGCATAT CGGCGCCAAC TCGCTCGTGG GCCTTGGAAA TGTCATTATC
GGTCCGGTTA CGATCGGCAA CGACGTTATC CTGGCGCAGC ATATCGTTGC CAGCGGCCTG
AACCATAATT ATCAGGACAT TCAGCAACCG ATTCACAAAC AGGGCGTAAG CGTTGCCCCT
ATCGTAATCG AAGACGAATG CTGGATCGGC GCCAATGCGG TGGTTACCGC GGGGGTTACC
ATCGGCCGGC ATTCGGTGAT CGCCGCGGGG GCCGTGGTGA CCAAGGACGT TCCGCCCTAC
TCGGTTGCCG TCGGAAACCC GGCGCGTATC ATCAAAAAAT ATGATCCCGA ATACAAAGAT
TGGGTTAAAG CTTCCTGA
|
|---|
| Protein sequence | MSLSDQIRNS PGLKKFVHWM LIPTNQARPR LWVRIFLNRF FHKRGKNVII RRWVRMDVLP
FNPFSIGDNS MIEDFSTINN GVGAVHIGAN SLVGLGNVII GPVTIGNDVI LAQHIVASGL
NHNYQDIQQP IHKQGVSVAP IVIEDECWIG ANAVVTAGVT IGRHSVIAAG AVVTKDVPPY
SVAVGNPARI IKKYDPEYKD WVKAS
|
|---|
| |