Gene Dfer_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0122 
Symbol 
ID8223688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp137726 
End bp139582 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content50% 
IMG OID644928001 
Productprotein of unknown function DUF303 acetylesterase putative 
Protein accessionYP_003084558 
Protein GI255033937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000207117 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.31182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCA TCAACAAATA TCGATTTTTT GAAATGAAAA TATTTTTCGT GTGGATATGC 
GTATTCACCT GCTTCATCGC CCATGTCTGC TTTGCACAAA CGGTGTCGTT GTCTTATCCG
GTTAATAACA GTGTAATTCA GCGCAATACG CTCAACACAG CCACTGTCAC CGTCGCAGGC
CAGCTTAATT ATGGCGATTT AACTGTTGTG GTCAGTTACA GGTTTCGCCC GGTGGGCCCG
ACTGGCATAA TGGGAGCGCC CGGGCCCGCG ACGAACCTGA CCCTGGCACC TAATGGCATG
TTTTATGCGC TACCCGTGGT GAACAAAGGC TGGTACTTGT GTGAAATCCT GGTGAACGGT
ATCGTTTACA CCGCCAATAA ATTTGGGGTA GGTGACGTAT TTATTATTGC CGGCCAATCG
AACGCCCAAG GTATTAAAGA CCAAAGCTAT AAGTTACCTT CCGGTGCAGG TATACCGGAG
TGGGTTGTAG GGGCGTCGGA AGATAAAACC TGTACACGAA AACTACCTGA ATCGTTCACC
AATCTGTTCC CTTTGAACAC AGCTGACGAT ATGAAAAAGC ATGGTCCATT GGGGCCGACG
GGAAACAGTG TATGGGCCTA CGGTGTTCTC GGCAAGCTGA TCTCAGATGC GAATGGCGGA
ATGCCGGTGG CATTTTTCAA TGCGGCTACC GCAGGATCGA GCGTCACGGA ATGGAAACAG
GGAGCCGATG GTGTTGAAGC CAAACATCCC TACACGGGAG CACAAGTTTG CTTGGGCTAT
ATGGGAGGTT CCGTGATTCC GAAAGACTAT TATGGACAAC CCTACACCGC GCTGAAAACC
GCATTAAATT ACTACGGATC GCTGTACGGC GTTCGCGCTG TCCTTTGGCA TCAGGGAGAG
GCCGACGCCG ATCCCAATGT TAATGCGATT TACAAAGCAA GCAGCGCTGC GGACTATCAA
TCAAAACTGC AAGCGGTTAT TGCAAAGTCC CGGTCTGATT TTGCGGCACC AAACCTTACC
TGGTACATTT GCAAAGCAAC AATCAGCAAG TTCGGTCCAG TCAATGCGAC GATCAGGACT
GGGCAAGGCA ATACGCCGTC GGGTTCAACG ATTCTCAGCG GTGCTGATAC CGACTACGTA
AATGGTAGTG CCGGAACGAC AACCGCTAAC GACGGGGGTG ACGATTACCG AGCCGACGAC
GATACTCATT TTTTCGAGGG GCTCGGAGCG ATAAAGGGCC TCACCTGGCT AGCCAATAAA
TGGGCCGCGA CCATTGGAGC GCTTACGAAC CCGGTAGCCG CCAGTTATGT TCCACTGCTC
TTATATAGTA AAAATAGCGA CTGGCGGACG CTCACTGCTC CTTCGGGCGG TGTTCAGTAC
CATTGGAATT CAACCCATAT CAATAACCAG GGCGTTGCGG GAGGGACGTC CAGCGTGTAC
ACAACAGATC AGAGTTGGTT CGGCATGAAA TGCTATATGA AAGATGCGAT CGGGAATTGG
CATGTTTCAG CAGCGATCAA TATTGGTCAT TATATCAACC AGCGCCAAGG AGTGGAATTC
CCCGGCGAAC AACAGCACGA AGAGCCCGGT TTTGAACTAA ATACCTATCC CAATCCATTC
ACCAACAGTT TTACCGTCGC ATTTGAGGTG CCGGAGGAAA ATTGCCAGGT CAAATTAGAT
GTCATCGATA TCCAGGGGAT GGTTCTGAAA ACCGTTGTGA ACAATCCGCA TGCGAAGGGA
AAGTGGCAAT ACGAAGTAAA AGAATTGCCT GACAATCCGC ACGGCATCCT GTTTTGCAGA
TTGAAAATCA ACGACAGTCA CACAGTGAGG AAGCTGGTGC GGTTTAATCA CCGATAA
 
Protein sequence
MTFINKYRFF EMKIFFVWIC VFTCFIAHVC FAQTVSLSYP VNNSVIQRNT LNTATVTVAG 
QLNYGDLTVV VSYRFRPVGP TGIMGAPGPA TNLTLAPNGM FYALPVVNKG WYLCEILVNG
IVYTANKFGV GDVFIIAGQS NAQGIKDQSY KLPSGAGIPE WVVGASEDKT CTRKLPESFT
NLFPLNTADD MKKHGPLGPT GNSVWAYGVL GKLISDANGG MPVAFFNAAT AGSSVTEWKQ
GADGVEAKHP YTGAQVCLGY MGGSVIPKDY YGQPYTALKT ALNYYGSLYG VRAVLWHQGE
ADADPNVNAI YKASSAADYQ SKLQAVIAKS RSDFAAPNLT WYICKATISK FGPVNATIRT
GQGNTPSGST ILSGADTDYV NGSAGTTTAN DGGDDYRADD DTHFFEGLGA IKGLTWLANK
WAATIGALTN PVAASYVPLL LYSKNSDWRT LTAPSGGVQY HWNSTHINNQ GVAGGTSSVY
TTDQSWFGMK CYMKDAIGNW HVSAAINIGH YINQRQGVEF PGEQQHEEPG FELNTYPNPF
TNSFTVAFEV PEENCQVKLD VIDIQGMVLK TVVNNPHAKG KWQYEVKELP DNPHGILFCR
LKINDSHTVR KLVRFNHR