| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0107 |
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| Symbol | |
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| ID | 8223673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 123020 |
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| End bp | 124651 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644927986 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003084543 |
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| Protein GI | 255033922 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0636933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAA TCACCGGCAC GAATCCGACA GACATCGACC ATCTCTGGTG GCAAACCGGA
ATTATTTACC AGATTTATCC GCGCTCGTTT CAGGATACGA ACGGCGACGG CATCGGCGAC
CTGAAAGGCG TCGTCCAGCG GCTCGACTAC CTGCAATGGC TCGGCATCGA CTGCGTGTGG
CTGTCGCCCA TCTACCCGTC GCCCATGGCC GATTTCGGCT ATGATATTTC TGATTACCAG
GGCATTCATC CGCTTTTCGG AACAATGGAG GACTTCGACG AGCTCCTGGA GCAGGTGCAT
AGCCGGGGAA TGAAACTTAT CCTTGACCTG GTGCCGAACC ACACCTCCGA CCAGCACCCC
TGGTTCCTCG AATCGCGCTC ATCGCGCGAC AATCCGAAGC GCGACTGGTA CATCTGGCAC
GACGCGGGCG AGAACGGCGC GTTGCCCAAC AACTGGCTCA GCGTATTCGG CGGGCATGCA
TGGGAATGGG ATGAAACCAC GCAGCAATAC TACTACCACG CATTCCTGAA ACAGCAACCA
GACCTCAACT GGCGCAATCC GGAAGTGCAG CAGGCGATGA TGGACGTCAT GCATTTCTGG
CTGAAAAAGG GCGTGGACGG CTTCCGGGTG GACGTGATGT GGCACATGAT CAAGGACGCC
CGGCTGCGCA ACAACCCCGT CGCTGCCAAC ACGCCATTCG TGGCAAGCGA CCTCATTTAC
GAATACCACG ACCCGGTGTA TTCCACCGAC CAGCCGGAAG TGCACGAGAT CGTGCGGATG
ATGCGGCAGG TGACCAATGA ATACGACGAG CGCGTGCTGA TCGGCGAGAT TTACCTTCCC
ATTCACAAAC TTGTTACCTA TTATGGCGCG GACAAATCCG GTGCGCATTT GCCGTTCAAC
TTCCAGCTGC TCACTTTGCC CTGGGATTCG CAGCAGATCG CCCGGGCGAT AGATGAATAC
GAAGGCGCAT TGCCGGCAGA CGGGTGGCCA AACTGGGTAC TCGGCAACCA CGACCAGCCA
CGCGTGGCCA GCCGGGTGGG ACGCTCGCAG GCACGCGTGG CCGCCATGCT CCTCCTGACA
CTCCGCGGAA CGCCTACCAT CTATTATGGT GATGAAATAT GCATGCGCGA CGTGCCCATT
CCGCAGGACG AGGTGGTAGA CCCGCAGGGA CTCAATATGC CCGACCGAAA TGTAAGCCGC
GATCCGTCGC GCACACCCAT GCAATGGGAC CCGGATACCA ATGCAGGATT TACCGACAGC
AAACCCTGGC TGCGGCTGCC GTACAGCTAC CAGCGCCAGA ATGTGGCATT ACAAAAAGAG
GATCCCGACT CGATGCTGTC GTTTTACCGC AGCCTGATCA ACCTCAGAAA ACGGCAACCT
GCATTCCAGA CCGGCAAATT CACACCTGTT TACTCGGACA AACAACTTAT CGCATTCATC
CGCGAGAACG ACGAGGACCG GTTCCTGGTA GTATTGAACC TTAGCCACAG GCCGGCCTAC
CTGAGACCTA AAAATGAAAC TTATAAGGGG GAAATCATCA TCAGCACGGA AACGGAGCGC
ATTGGCCTGC GCGTCGATAA CAACCTGCTG CTGAGCGGCG ATGAGGGATT GATTGTGAGA
TTGGAACGTT GA
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| Protein sequence | MESITGTNPT DIDHLWWQTG IIYQIYPRSF QDTNGDGIGD LKGVVQRLDY LQWLGIDCVW
LSPIYPSPMA DFGYDISDYQ GIHPLFGTME DFDELLEQVH SRGMKLILDL VPNHTSDQHP
WFLESRSSRD NPKRDWYIWH DAGENGALPN NWLSVFGGHA WEWDETTQQY YYHAFLKQQP
DLNWRNPEVQ QAMMDVMHFW LKKGVDGFRV DVMWHMIKDA RLRNNPVAAN TPFVASDLIY
EYHDPVYSTD QPEVHEIVRM MRQVTNEYDE RVLIGEIYLP IHKLVTYYGA DKSGAHLPFN
FQLLTLPWDS QQIARAIDEY EGALPADGWP NWVLGNHDQP RVASRVGRSQ ARVAAMLLLT
LRGTPTIYYG DEICMRDVPI PQDEVVDPQG LNMPDRNVSR DPSRTPMQWD PDTNAGFTDS
KPWLRLPYSY QRQNVALQKE DPDSMLSFYR SLINLRKRQP AFQTGKFTPV YSDKQLIAFI
RENDEDRFLV VLNLSHRPAY LRPKNETYKG EIIISTETER IGLRVDNNLL LSGDEGLIVR
LER
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