Gene Dfer_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0098 
Symbol 
ID8223664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp113620 
End bp114717 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content57% 
IMG OID644927977 
ProductCytochrome-c peroxidase 
Protein accessionYP_003084534 
Protein GI255033913 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTCG TGCCGGGCAT GGTACTGGCC GGCCTGGCGC TGGCATTTGC AGCCTGCCAA 
AAAGAGGAGC GGCCTGTGGA GCCTGTCTGG ACCGGTCCCA CGGCCGTGAC CTGGAAGAAA
CCCGCGCATT TTCCCGATCC GGTGTATGAT TTGAGTACAA ATCCGCTGAC CGAGGAAGGG
ATCGAGCTGG GGAAGTTCCT GTTTTACGAT GGTATCCTGT CGCGTACCAA CCAGATCGGC
TGCGGCACCT GCCATCAGCA GGAGGCTGCA TTTACCCATC ACGGGCATGA GCTCAGTCAT
GGCGTCGACG ATCTGCTTGG GACGCGTAAC TCGCCTTCGA TCCAGAACCT GGCCTGGAAC
CCGGTTTTCT TTTGGGACGG GGGCGTGCAT GATCTGGACA AAGTCCCATT CAACCCAATC
CAGAATCCGG TGGAGATGGA CGAAACGGTC AAGAATGTGA TTGCCAAGTT GCAGGCCACG
CCGTTGGCTA CCGCCAAAAA GCCGGTGAAT TATCCCGAAA TGTTCCGCAA GGCATTTGGC
GACGATCAGA TTACCACCGA GCGGATGATG AAGGCACTTT CGCAATTCAT GCTCACGATG
GTTTCGGCCG AATCGCGCTA TGACTTTTTC AAACAGGGCG ATGGCTCGGC GCTGAATGCG
CAGGAGCAGG AGGGGCTGGT GCTTTTTAAG GCCAAATGCA GCAGCTGCCA CACGGGAGAG
CTTTTCACGG ATCACAGCTT TCGCAACAAT GGGCTGGTAC CGCTGCGGCT GGACGATAAA
GGGCGTTCCG AAACATCCGG CGATCCGGCA GATAAGTACA AATTCAAAGT GCCCAGTCTG
CGCAATGTCG GTCTGACGGC GCCCTACATG CATGACGGCC GCTACCATAC GCTGGAAGAG
GTGCTGGATC ACTACACCTC GGCGGTGCAG CAGTCCCCGA CGCTCGATCC GGGATTGCAG
CGCGCCGACC GGAAGCCGGG CATCGATATG ACCGACAGCG AGAAAAAGTC CATTATCGCA
TTCCTCAGGA CGCTTAGTGA CGAGCAGTTC ATCCGAAATT CCAAACTTTC CGATCCCGGG
GTCGGGACGA ATTTTTAG
 
Protein sequence
MDVVPGMVLA GLALAFAACQ KEERPVEPVW TGPTAVTWKK PAHFPDPVYD LSTNPLTEEG 
IELGKFLFYD GILSRTNQIG CGTCHQQEAA FTHHGHELSH GVDDLLGTRN SPSIQNLAWN
PVFFWDGGVH DLDKVPFNPI QNPVEMDETV KNVIAKLQAT PLATAKKPVN YPEMFRKAFG
DDQITTERMM KALSQFMLTM VSAESRYDFF KQGDGSALNA QEQEGLVLFK AKCSSCHTGE
LFTDHSFRNN GLVPLRLDDK GRSETSGDPA DKYKFKVPSL RNVGLTAPYM HDGRYHTLEE
VLDHYTSAVQ QSPTLDPGLQ RADRKPGIDM TDSEKKSIIA FLRTLSDEQF IRNSKLSDPG
VGTNF