Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0077 |
Symbol | |
ID | 8223643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 93879 |
End bp | 94544 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644927956 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003084513 |
Protein GI | 255033892 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.301453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.361737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CACTCATTGA TGACCACCAG ATTCTTTCCG ACGCCTTAAA AGTGAATCTG ATGCATTCGC TGCCAGAGAT CGAATCCATT CATCACTTCA ACTCATTTGA GCCTTACGCT GCCGTCGCCG ACGATAGTAT CCCTACGATC GTAATTACGG AGCTTGCCTT CAATGGCAGA TATGACAAAG GTGTTGACGC CATTTTTCGC CTCAACCTAA AGAATACCCA AATCATCGTC CTCACCTCCC TGACCGACGA CTGGCTTATC CGCAGCTATA TGCGATTAGG CGCAAGGGCA TTTTTGACGA AGACCTGCCA ATACAAAGAG CTCCTGGAAG CGATTACGCA GGTCCGGAAA GGCAATTTGT TCTTGTCGGA ACATGTCCAA AACATACTGT TAACAAGAAT TGAAACCGGT GGAATCTCGG CGGAATCCCT GTCCAGCGTC GAAAGGGCCA TAATGGAGGC ATTATCCCAG GAAGAACCAC TGAAATCAAC CGCACAAAAA TTGAAAATCT CACTGATTGA GCTCAAATAT CATCGTAAAA TGCTCATGAC CCGTTTCAAT GTCCGGAACT TCGCCGACCT CGTCGAGCTT GCAAGAAGGC CGGGCTTTTT TACGGAATCG GCCGCTGAGA GATCGGCTGT CGAACACTCG GTGTGA
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Protein sequence | MKIALIDDHQ ILSDALKVNL MHSLPEIESI HHFNSFEPYA AVADDSIPTI VITELAFNGR YDKGVDAIFR LNLKNTQIIV LTSLTDDWLI RSYMRLGARA FLTKTCQYKE LLEAITQVRK GNLFLSEHVQ NILLTRIETG GISAESLSSV ERAIMEALSQ EEPLKSTAQK LKISLIELKY HRKMLMTRFN VRNFADLVEL ARRPGFFTES AAERSAVEHS V
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