Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0071 |
Symbol | |
ID | 8223637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 87561 |
End bp | 88487 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644927950 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003084507 |
Protein GI | 255033886 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.462194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.509071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAG GTTTCAGATT GGATCAGGTG GCGGTTTCGG GGGAGAAATC GCTGAAAACT TTGGTGGAGA ACCGCAGGGC TTTCACGCTG GAAAACTGTG AGCTGAATTT GTTCGAGACT TTGCAGCCGT CGGCATTGGT GCCACTTACA TTTCCGGATT TTGTGGTGAC GAGCATGCTG CGGGGAAAGA AGGTGATGCA CCTGTTCGAT CAGCCGGGCT TCGATTACCT GCCGGGCGAA ACGGTGCTCG TTCCGGCAAA CGTGACGATG AAAATCGACT TCCCCGAAGC ACAGCGCGAT AATCCTACCC AATGTATCGC GCTCGCGATC GACCATACGA AGATCCAGCA AATCGTCGAT CGCCTCAGCG AAACTTACCC GCGCGAAGGC CGGCAGCAGT TCTGGTCGTT GCAGCATAAC CAATACCATT TCCTCAATAA TATCGAACTC GCGCAGACGC TCAACAAGCT CATCAAAATC TGCTCGGGCA GCGCATTAGG TAAGGATATC CTGGCGGACC TTACGTTGCA GGAGCTCATT GTGCACATTA TCCAAACCCA GCACCTGGCC GCCACCGACG ACGCGGCGTA CCAGCACGAG GACAATCCCC TGGCATTTGT GGTGAACTAC ATCAAGGCCA ATATCAATGA AAAGATCCAG GTAGAAGACC TCAGCGAAAA AGCATGCATG AGCCGGGCCT CATTCTACCG CGCATTCAAA CGCGAGTTCA GCATCAGCCC GCTGGATTTC ATATTGAGGG AGAAAATTAA AAAAGCCAAA CAACTCCTTT CACACACGAA AGACAGTATT TCGGACATTT GCTACCAGCT CGGCTTCTCG GATTTGAACT ATTTCGGACG ACAATTCCGC AAATCCGAAG GCATCTCACC AAGTCAGTAC CGGAATGTGA CCAGCCGGGA GGAATGA
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Protein sequence | MAAGFRLDQV AVSGEKSLKT LVENRRAFTL ENCELNLFET LQPSALVPLT FPDFVVTSML RGKKVMHLFD QPGFDYLPGE TVLVPANVTM KIDFPEAQRD NPTQCIALAI DHTKIQQIVD RLSETYPREG RQQFWSLQHN QYHFLNNIEL AQTLNKLIKI CSGSALGKDI LADLTLQELI VHIIQTQHLA ATDDAAYQHE DNPLAFVVNY IKANINEKIQ VEDLSEKACM SRASFYRAFK REFSISPLDF ILREKIKKAK QLLSHTKDSI SDICYQLGFS DLNYFGRQFR KSEGISPSQY RNVTSREE
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