Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0064 |
Symbol | |
ID | 8223630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 78096 |
End bp | 79424 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644927943 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_003084500 |
Protein GI | 255033879 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0265709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.16241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CAGTTGTAGG TACGGGCTAT GTCGGCCTTG TAACGGGTAC CTGTTTTGCT GAAACCGGAA ATCAGGTTAC ATGCGTCGAT ATTGACGCAA ACAAAGTTGC GCGAATGCAA CGCGGTGAAA TTCCCATATT TGAACCTGGA CTTGAAGTTC TTTTTGTGCG AAATATCGCT GAAGAGCGGT TGAAATTCAC TACAAGCCTG TCGGAGGGAA TCCAAGATGC AGAAGTGATA TTTCTGGCCT TACCCACTCC ACCGGGCGAG GACGGGTCTG CGGACCTTAA GTACATACTT GGTGTTGCGC AAGAACTGGG ACCGTTGCTG GAAGATTATG TGGTTGTCAT TGACAAAAGC ACTGTTCCAG TCGGTACGGC AGAAAAAGTA AGAGAAAAGA TTGCACAAAA CGCCAAGGTT GATTTTGACG TGGTTTCCAA TCCGGAATTT TTGAGGGAAG GGGTCGCTGT CGAAGATTTT ATGAAGCCGG ACCGTGTGGT CGTAGGAACT AGCTCCGAGA ATGCAAAGAA GGTAATGGAG AAGCTTTATT CGCCGCTGCT CCGTCAGGGA AATCCGATCA TTTTTATGGA CGAGCGTTCC GCAGAGATGA CCAAATATGC AGCTAACTCC TTTTTGGCTA TGAAGATCAC GTTCATGAAC GAGATTGCAA ATTTGTGTGA GCGGCTGGGT GCGAATGTAG ACGATGTAAG GAAGGGAATC GGTACGGATA GCCGAATTGG CAAACGGTTC CTTTTTGCGG GAATTGGCTA TGGAGGTAGT TGCTTTCCGA AGGACGTGCA AGCACTGGCT AAAACATCTC AGGACTACGG ATACGACTTT CGCACACTGC ATGCTGTGAT GGCCGTCAAC AACGACCAGA AAACGAAGTT GATTCCAGCG ATAACAGAAT ATTTCGGCGG AAGTCTGAGC GGAAAGACAA TTGCAGTTTG GGGACTAGCA TTTAAGCCCT ATACAGACGA CATCCGTGAA GCGCCTGCCC TTGAAAATAT CAGAATTTTG ACAGCTGCCG GCGCGAATGT GGCTGTGTAC GATCCGGAAG CAATGGATAA TGTCAAACAG CTTCTGCCTG ATATCACTTA CTGCCATACT GCTTACGCAG CACTGGATGA TGCCGATGCG CTGATGATAT TTACAGAATG GCCTCAATTC AGAACGCCTG ATTTTGACAA AATGAGCAAA CTTCTTAAAG CAAAAGTCGT TTTCGACGGA CGAAACCTGT ACGAAATTTC AACGATGCGT GAGCTAGGAT TCACTTACTT CAGTATCGGA AGAGAAGCTG TAAATCGGGT TGAGAGCGAG GTCTGCTGA
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Protein sequence | MKIAVVGTGY VGLVTGTCFA ETGNQVTCVD IDANKVARMQ RGEIPIFEPG LEVLFVRNIA EERLKFTTSL SEGIQDAEVI FLALPTPPGE DGSADLKYIL GVAQELGPLL EDYVVVIDKS TVPVGTAEKV REKIAQNAKV DFDVVSNPEF LREGVAVEDF MKPDRVVVGT SSENAKKVME KLYSPLLRQG NPIIFMDERS AEMTKYAANS FLAMKITFMN EIANLCERLG ANVDDVRKGI GTDSRIGKRF LFAGIGYGGS CFPKDVQALA KTSQDYGYDF RTLHAVMAVN NDQKTKLIPA ITEYFGGSLS GKTIAVWGLA FKPYTDDIRE APALENIRIL TAAGANVAVY DPEAMDNVKQ LLPDITYCHT AYAALDDADA LMIFTEWPQF RTPDFDKMSK LLKAKVVFDG RNLYEISTMR ELGFTYFSIG REAVNRVESE VC
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