| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0054 |
|---|
| Symbol | |
|---|
| ID | 8223620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 67436 |
|---|
| End bp | 68353 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644927934 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003084491 |
|---|
| Protein GI | 255033870 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.510495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.478799 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGT TATCTCAAAA CCCAAGGATC AATGTTCTTA AATGCCACGG CAACCTGTTC
AGTCGCTTTT CCCAATTAAC AAATTACTTG AAATCAAATC GGGTAGATTG TATTTTCAGT
TATTTGACTG CCGCCAACGC ATTTGCAGCG CTTGCAGGGA AAGTTGCCGG TGTAAAGAGC
TATTTTCCCG GCATACGAAA CGCTTACCTT CCCCCTGCCA AGGCAATTGC GGATCGCTTC
ATAACCAATC GATATGCAAC GCGGACCGTC CTGAACTGCC ATTCAGGCAA GAGCTACTTT
TTGACGCAAG GCTTTGCGAA CGAAAAAATG GTCGTCATCC CAAACTGCTT TGAAAATATT
TCAGCGTACA CTAAAAAACC CGAGGATAAT GTAACCCGCA TTATTACGGT GGGTCGATTT
GTGGCACAGA AGGACTACAA TACTGCATTA AAGGTAATCG CTTCGTTAAA AAGTAATAGT
GCGAACATCA TTTTCACCAT CGTGGGATAT GGCGAACTTG AGCAAGAAAT TCGTGCGCAG
ATCAAGCTTT TGAATTTAAC GGAGATTGTG GAAGTTCATA TTAATCCAAA TAATATTCCG
GAATTACTCA ACCGCTCTCA TATCTACCTG TCGACTTCGC TTTTTGAAGG CACCAGTAAT
TCGATTATGG AGGCAATGAA TGCGGATCTC CCCATTGTTG CAACGAACGT GGGCGACAAC
AACGCATTGA TCCAAGAGAA CCTAAATGGA TTTCTCTGCG ATGTGAAGGA TGTCGATGCG
ATTGCTGGCA AGCTGCAATG CCTCATTACC GATCCTGACA GAAGGGCTGA AATGGGTAAG
AAAAGCAAGG AACACCTCAT CAACGAATTC TCGATGGATA AGTTCAGAGA ATCTTATGTC
CAATTAATTG AAAGCTAA
|
|---|
| Protein sequence | MDLLSQNPRI NVLKCHGNLF SRFSQLTNYL KSNRVDCIFS YLTAANAFAA LAGKVAGVKS
YFPGIRNAYL PPAKAIADRF ITNRYATRTV LNCHSGKSYF LTQGFANEKM VVIPNCFENI
SAYTKKPEDN VTRIITVGRF VAQKDYNTAL KVIASLKSNS ANIIFTIVGY GELEQEIRAQ
IKLLNLTEIV EVHINPNNIP ELLNRSHIYL STSLFEGTSN SIMEAMNADL PIVATNVGDN
NALIQENLNG FLCDVKDVDA IAGKLQCLIT DPDRRAEMGK KSKEHLINEF SMDKFRESYV
QLIES
|
|---|
| |