Gene Dfer_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0052 
Symbol 
ID8223618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp64941 
End bp66305 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content45% 
IMG OID644927932 
Producthypothetical protein 
Protein accessionYP_003084489 
Protein GI255033868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.982128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.390237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCTC TGAGAACACG ATTTAAACTA TTTACGATCC TACTAATTGT ATCCTGGTGT 
GGCAGGTGCT TTGCGCAGCA CGAAACATTT AAAAACTTTT ATGGGATTGC ATGGAGAGGA
AAAGCGCATG ACAATCTCGT CTACGCGCGA AATATGGGAT ATCGATATGT ATTTTATCAG
CAGGGCATGG AGAATGACCC CCTGTCAGAT AACTTACATT TTTACCTTGA GTCTCCCGAG
TATACAATCT ATAAGCGGAC CCTAAGCCTA AACCGAACCT ATCCTGAAAA GGATGTTCGC
TTTTATGAGC AGCACTGTAC CGTAAGCGAG CCAGACCAAC AATTTCCTCG TAATATGGCA
ACTGGCTGGT TCTTTAACGA AACTGACTTT TCTGTCGAGC TGGACTTCCG AAACAAAGAT
GTCGTGAATT GGGCGGTGCA GGAAATATTG AAAAAAGTGA GAGAAATAGA ATCACGAAAT
CCGAAATTCA AGTTCGCCGG ATTCGCATGG GACGTTCCCC AATTAACCGG TGACTTCTGG
AGTGCCCCCG CTCAAAAGGG TGGAAAACAA GTGACACTGG AATACTGGCA AAGTAAAAAC
CAAACTTTAC GCCAGCAGAG TAAACCATCT TACACCCGCG GTCGAACCGC TTACTACCAG
GTGCTTTTCG CCGCTATGCG GCAACGTTAT CCCGACGCAA GAATAATTAT GGAACCCGCC
AAGATTTATG ATGATTGGGT AAAAGTGGTA GCAACCCATA ATGTTCCGGA TTCCATCATG
CCCGATTTGT TATGTCAGGA AGCAAGTGAT TTGAAATTTG TTTCGGATCC GAGAATTTTA
AGTTCAGGCA AAATTAAGAA AAGTCAATTG GCAAGCACCA CGCCAAATGT TTTTGGAGAA
GTGGAGAACA GGACGATTGC GGCTACAATG GCAATTAACG GCGCCTGGTT TTCGTGGTAC
GGGAGGTTTG GCGGCACAGG AAACATGCCG GACTTTAAGA ATATTGCGGA GGTTCCTGCC
CGGTTAAAGT TGATTCGGGT ATTACCCAAC TGGGAAAATT TGAATGACAC CCCCCTAAAC
GACAGGATAT TTCTTAATAA TGAGTATAAG AGTCCCACGG CTGGAATGTC AAGTGGCCTT
TTGTGGGGTA GAAAGCCGGG CACCAATGAC ATTCTTTGCG TCTTTCTTTC CTTAGATGAA
GCCGTCCAAT TTCCAGTTAG CAATAAAGAA GTACAGATAT ACCAGCTGGA CAGTTTGATG
GGACCTTCAA AAAACGCCGA AAAGATGTTC CGTATCTCAA ACCGAAGTGC AATGCTACGA
GACTCGACAC GTGTTGGGGA AGCATTCCTT TTCAGATTCA AGTAA
 
Protein sequence
MVSLRTRFKL FTILLIVSWC GRCFAQHETF KNFYGIAWRG KAHDNLVYAR NMGYRYVFYQ 
QGMENDPLSD NLHFYLESPE YTIYKRTLSL NRTYPEKDVR FYEQHCTVSE PDQQFPRNMA
TGWFFNETDF SVELDFRNKD VVNWAVQEIL KKVREIESRN PKFKFAGFAW DVPQLTGDFW
SAPAQKGGKQ VTLEYWQSKN QTLRQQSKPS YTRGRTAYYQ VLFAAMRQRY PDARIIMEPA
KIYDDWVKVV ATHNVPDSIM PDLLCQEASD LKFVSDPRIL SSGKIKKSQL ASTTPNVFGE
VENRTIAATM AINGAWFSWY GRFGGTGNMP DFKNIAEVPA RLKLIRVLPN WENLNDTPLN
DRIFLNNEYK SPTAGMSSGL LWGRKPGTND ILCVFLSLDE AVQFPVSNKE VQIYQLDSLM
GPSKNAEKMF RISNRSAMLR DSTRVGEAFL FRFK