Gene Dfer_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0038 
Symbol 
ID8223604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp40309 
End bp41694 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content51% 
IMG OID644927918 
Producthypothetical protein 
Protein accessionYP_003084475 
Protein GI255033854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.135571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.54702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA AGCCTTATTC CTTCGGGAGG TCGTCCATAG TCAATAAGCT TCTGATCATA 
ACCGGATTTG CGTTTTCTCT CACGGCATGT GAGTGGGGGG ACGAAATTAA ATCTCTCTCC
CAACCGAATC CCGACGATTT CGCCGTGCTG ATGTCCGATA CGGTTACCAT CCAGCTCTCG
ACGATGGCAG TCGACTCGGT CATGACAGGC GGGCCTGCCC GGATGCTTGC CGGTTCTTTT
AAAGATCCCT ATTTCGGTAA GGTGAAGACG ATGACATTTT TCCAGCCTAC CCGCAAAGAA
GGGCTGGCCA TCGCGAAGGA AGCCCAGTAC GATTCGCTGA TATTGTCATT AAAATATGAC
AACCGGTTCA GCTACGGCGA CACCACGAAG CCGATGAACC TGACCGTTTA CCGGTTGCTG
ACGGATATTA CGGAGAAAAG TTCTTACTGG AACCATAATT CCACCGCCTA CGACCCGAAA
GCGATCGGGA AGGCTACCAT TATTCCGCGT CCTACAACCA CACAACAGCT CAGAATACGC
CTTTCGGATG AAATCGGGAA GAAGGTCTTT GAAATAGCTC AGAATAATCA GTTTAACTCC
GAGCAGGACT GGCTGGATAT TGTGAAGGGA TTGGGCCTTG CGTCGGCTCC TACGGACAAT
GGCGCAGTAG TCGGGTTCCG TACGGATAGC ACCTCAGTGC AGCTTCACTA CCACACGCCA
TTAGTGAGCG AATACAAAAA AGACTCGGCG GTATTCCCTG TCATTGGGCG GTACAACCAG
ATCGTGTCCG ATCCGGCCGG CACCCAGCTC GCGAAGTTAC CGACCAACAG AAGGTTATCG
CTGCCCTCGT CCCAATCGGG CAATATGGCA TTCATGCAGG CGGGAACAGG TGTAATGATC
CGCGTCGACC TGCCATATCT TAGAAATCTG AAATACACGC AATACACTGC CATTAATAAG
GCATTCCTGC GCATAAAACC GCTGCGTGCG TCGGTTACCG ACCAGTACCG TGTTCCGCCG
GCACTTTATC TGTACCGCGT GGATCGGAAC AACCAGTTTT ATACGGACGG AAATGGCGGC
ACATTGCCGA TTTATATGCT CGGCGGACAA GTGCCTGTCA GCAGCCGTTA CATCAGGGAC
CTAGTTAATA ATGAAGAATA TTACCTTTTC GACATCAGCT CATTCGCTAC CGAGCTCATG
ATCTCGGAAA CGAACGACGT CGGCGGCTTC GTCATCCGCA GCAGTCCCTA CAATTCCAGC
AGCTCGTTCC GCGATGCCAA TACCGATTAC AGCATGAATG TGAACAGGCT CGTGATTGGC
GATCAGCGCC ATTCGGAAAG AGGTGTGGAG CTCGAACTAT TCTACACGAG AGTTAAGCCT
AAATGA
 
Protein sequence
MKFKPYSFGR SSIVNKLLII TGFAFSLTAC EWGDEIKSLS QPNPDDFAVL MSDTVTIQLS 
TMAVDSVMTG GPARMLAGSF KDPYFGKVKT MTFFQPTRKE GLAIAKEAQY DSLILSLKYD
NRFSYGDTTK PMNLTVYRLL TDITEKSSYW NHNSTAYDPK AIGKATIIPR PTTTQQLRIR
LSDEIGKKVF EIAQNNQFNS EQDWLDIVKG LGLASAPTDN GAVVGFRTDS TSVQLHYHTP
LVSEYKKDSA VFPVIGRYNQ IVSDPAGTQL AKLPTNRRLS LPSSQSGNMA FMQAGTGVMI
RVDLPYLRNL KYTQYTAINK AFLRIKPLRA SVTDQYRVPP ALYLYRVDRN NQFYTDGNGG
TLPIYMLGGQ VPVSSRYIRD LVNNEEYYLF DISSFATELM ISETNDVGGF VIRSSPYNSS
SSFRDANTDY SMNVNRLVIG DQRHSERGVE LELFYTRVKP K