Gene Dfer_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0037 
Symbol 
ID8223603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp38786 
End bp39826 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content50% 
IMG OID644927917 
ProductKelch repeat-containing protein 
Protein accessionYP_003084474 
Protein GI255033853 
COG category[S] Function unknown 
COG ID[COG3055] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0861801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.239294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATA CCTTAAAAAA GACTTCGTTA GCCCTTCTAG TCGCTTCCAC TGCCCTGGTT 
CAGATGAGCT GTAAAGACGA TGATGAGTCC GCAAAACTCG GAAACTGGTT CAGAAAAGAT
CTGCCTAGCT ATGGAGGCTC GATCCGTACC AACGCCGTAA GTTTCGTGAT TGGCAACGTA
GGTTACATTG GTACTGGTTA TACAAACGAA GCTGTTGCCC GGGCAAAAGA CTTTTGGGCT
TACAATGCCG AAAGACAAAC CTGGTCGCAA ATCACTCCAT TCCCAGGCAC CGCCCGTAAC
AATGCAACGG CGTTCGTGCT GAAAGGAAAA GCTTATGTAG GCGGCGGCTT CGACGATGTC
CGTACCGTTG ACAATGGATA CAAAAAAGAT TTCTACGAAT ACGATCCTGC TACCAACAAA
TGGGATGCGA TCGCCGACTT CGGCGGCGGC CCGCGCCAGT TCGCAACTTC ATTCGTGGTG
AACGACAGAG CTTACGTTGG CCTTGGCTAC AACAGCAGCA ACTATTACCA GGATTTCTAC
GAATACAACC CTACTACCGA CAAATGGACC GAAATGGCGA CATTTAAAGG TGGTAAGAGA
ACTGGTTCAA TCGCATTCAC CATCGGTGAT AAAGCATATG TAGGTTTCGG AAAAAGCAAC
TCCGGAACGT TGTTCAAAGA CATTTACAGC TTCGACCCTG CCGGAAACGC CGGTGCGGGT
AACTGGACCC GCGTTGATTT CGCAGCCGGT TTTGACCAGG AGTCATTCCC GACACGCGCT
TATGGTCTTG CATTCGTGAT CGACGGCAAG TCTTACATCG TGGGTGGAGA AGGCCGTTCC
GACGTTTGGG AATTCGATCC GGGCGCGAAC TCATGGACAG AAAGAGCTTC ATTCCCAACG
CAGCGCGGTT TTGCGGGCGG ATTCGTAATT GGCAAGATCG GTTATCTTGG AACCGGTAGC
GCAAGCGGCA ATGGTAATGG TACCGACGAT TTCTGGGGCT TCGATCCTTC ACAACCAATC
AACGACGACG ACGATCTGTG A
 
Protein sequence
MFNTLKKTSL ALLVASTALV QMSCKDDDES AKLGNWFRKD LPSYGGSIRT NAVSFVIGNV 
GYIGTGYTNE AVARAKDFWA YNAERQTWSQ ITPFPGTARN NATAFVLKGK AYVGGGFDDV
RTVDNGYKKD FYEYDPATNK WDAIADFGGG PRQFATSFVV NDRAYVGLGY NSSNYYQDFY
EYNPTTDKWT EMATFKGGKR TGSIAFTIGD KAYVGFGKSN SGTLFKDIYS FDPAGNAGAG
NWTRVDFAAG FDQESFPTRA YGLAFVIDGK SYIVGGEGRS DVWEFDPGAN SWTERASFPT
QRGFAGGFVI GKIGYLGTGS ASGNGNGTDD FWGFDPSQPI NDDDDL