| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0015 |
|---|
| Symbol | |
|---|
| ID | 8223580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 15003 |
|---|
| End bp | 16295 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644927894 |
|---|
| Product | protein of unknown function DUF819 |
|---|
| Protein accession | YP_003084452 |
|---|
| Protein GI | 255033831 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5505] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.193687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTCC GGCACATTTC TCTTATTTTT ACCCATGAAC CTTTCCCTAA TCCTTACTCC
GACCGCATGA TTACCAACGA CGCCGTAGTG CTCGGACTCT TAATGCTTAT TCTGGCCGGC
ATATTTTTCA CGGCTTCACA GCCCGGCTGG AAACGGTTTT ACAACATCAT TCCTCCCTTG
CTGCTTTGCT ACTTCATACC GGGTTTGCTC AACTCGCTGG GCATTGTCAA CGGCGCGACG
TCGCAGCTCT ATCCGGTCGT TTCGAAATAC TTTCTCCCCG CGTGCCTTGT GCTTTTCACC
GTCGGAATGG ACTGGAAATC GCTCACCAAG CTCGGCCCGA AAGCGTTGGC AGCGATGCTG
ATCGGCACGG CGGGCATTAT GATTGGTGGG CCGGTGGCAT TATGGATCGT CAGCACCATC
AGCCCGGCGA CGGTGGCAGG TGAAGGGGCC GACGCCGTCT GGCGCGGACT GGCGACGATC
GCAGGCAGCT GGATCGGCGG CGGGGCTAAT CAGACTGCAT TACGGGAAGT ATTTCATCCA
AGCGATGCAT TATTCTCTCA GATGGTGGCT GTCGACGTGC TCGTTGCAGA ACTCTGGATG
GCCGCATTGA TATATGGAGC CGGCATTGCC TCGCGTGTGG ACGCATTCCT GGGCGCGGAT
AGCCGCACGG TGCAGGAGGT GAGGGAACAT ATGGATTCGG AACAAAAGGC CAACGAACAA
AACCCGATGC TGCGGGATTA CATTTTCCTC GCGGCGGCAG GCTTCGGTGC GACAGGGGTA
GCCCATGGTT TAGCGGAAAT TATTACGCCC TATTTATCAG CCAACTACCC GGCGCTCGAA
AAATACAGCC TTACTTCCAA CTTTTTCTGG GTGATCAGCA TTGCTACATT AATCGGCATC
CTGCTCTCCC TCACGCCCGC ACGTAAGCTG GAACATTATG GCGCGTCAAG ATTGGGCTCG
GTGTTCCTCT ATGTGCTGGT TGCAACCATT GGAATGCAAA TGGATCTCGG CGCTGTTGCC
GACAATCCAG GGTTATTTGC CATTGGATTA ATCTGGATTT CAATCCACGG CATTATCCTC
GTTATCGCCT GCAAATGGCT AAAAATACCG TTCTTTTTCC TGGCGGTGGG CAGTCAGGCC
AACGTGGGCG GCTCTGCTTC GGCATCGGTG GTAGCGGCGG CATTTCACCC ATCGCTGGCG
CCCGTAGGCG TGCTGCTGGC TATTTTAGGG TATGCAATCG GAACTTATGG AGGGTATTTG
ACTGCTTTAA TGATGCAATG GATCAGCACC TAA
|
|---|
| Protein sequence | MHFRHISLIF THEPFPNPYS DRMITNDAVV LGLLMLILAG IFFTASQPGW KRFYNIIPPL
LLCYFIPGLL NSLGIVNGAT SQLYPVVSKY FLPACLVLFT VGMDWKSLTK LGPKALAAML
IGTAGIMIGG PVALWIVSTI SPATVAGEGA DAVWRGLATI AGSWIGGGAN QTALREVFHP
SDALFSQMVA VDVLVAELWM AALIYGAGIA SRVDAFLGAD SRTVQEVREH MDSEQKANEQ
NPMLRDYIFL AAAGFGATGV AHGLAEIITP YLSANYPALE KYSLTSNFFW VISIATLIGI
LLSLTPARKL EHYGASRLGS VFLYVLVATI GMQMDLGAVA DNPGLFAIGL IWISIHGIIL
VIACKWLKIP FFFLAVGSQA NVGGSASASV VAAAFHPSLA PVGVLLAILG YAIGTYGGYL
TALMMQWIST
|
|---|
| |