Gene Dfer_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0014 
Symbol 
ID8223579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp14298 
End bp14990 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content53% 
IMG OID644927893 
Productoxidoreductase molybdopterin binding 
Protein accessionYP_003084451 
Protein GI255033830 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.266694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA ACAGCAAACT CGATAAAATC GTCGAAGCGC GGATGAAGCT CAAAGCCCGC 
TTCGAACAGC AAATGGCGGA AACGCCGTCG GTTTCGGACA CAAAGCCGAT GGGCACTGGC
GAGCCGAACC GCCACGGGAT GCCACAATTG CCTGTCGGGC AATACAAAAC GCATAAATGG
CCGGTACTCG ACCTGGGTTT CAAACCAGAC ATTCACCTTA GCAAATGGAA GCTCGTTATT
GACGGCGAAG TGGAATCTCC GATCACATTA ACCTGGGACG AGTTCATGGC ATTGCCTCAA
ACCAGCGATG TCAGCGATTT TCATTGCGTT ACCACTTGGT CGCGCATGGA TGTGCCCTGG
GTAGGCGTCC GTCTGGCTGA CATTGCCGCA TTAGTCATGC CAAAACCGAG CGCTACGCAC
GTGCTTTGTC ACGGCTATGA TAAATACACG ACCAATCTTT CGCTGGAAGA AGCATTGAAA
GAGGATGTGT TGCTTGTCCA CACCGCCGAC GGCAAACCGC TCGAACGCGA TCACGGCGGC
CCGGTGCGAA TGATCACCCC GCAGCTCTAC GCCTGGAAAG GCAGCAAATG GATCAGCCGC
ATTCAGTTTT TACCTAAAAA CCAATTGGGA TTCTGGGAGT TGAGGGGATA TTCCAACACG
GCCTACCCGT GGAGGAACGA TCGGTATAGC TGA
 
Protein sequence
MEDNSKLDKI VEARMKLKAR FEQQMAETPS VSDTKPMGTG EPNRHGMPQL PVGQYKTHKW 
PVLDLGFKPD IHLSKWKLVI DGEVESPITL TWDEFMALPQ TSDVSDFHCV TTWSRMDVPW
VGVRLADIAA LVMPKPSATH VLCHGYDKYT TNLSLEEALK EDVLLVHTAD GKPLERDHGG
PVRMITPQLY AWKGSKWISR IQFLPKNQLG FWELRGYSNT AYPWRNDRYS