| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0011 |
|---|
| Symbol | |
|---|
| ID | 8223576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 12284 |
|---|
| End bp | 12937 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644927890 |
|---|
| Product | protein of unknown function DUF1684 |
|---|
| Protein accession | YP_003084448 |
|---|
| Protein GI | 255033827 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3358] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.160968 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAA ATAAAGTCAT CCGATACAGC ACGATCGCCA TGTTCATCGC GATCCTCGCC
TATCTCATCA TCGAAAACAT GGGCGGCAGC AGCAGCTCCG ACGACGCCGT GGCAGCCAAC
CCCGCATTAT ATAAAACCAA GCTCCTCGAA GAACGTGCCG CCAAGGACGA GCAGTTCAAA
ACGGGCGACG ACTCGCCTAT CAAGGACAAG GATAGCTTCC ACGGCCTCCA CTACTTCGAA
CCCAACCTCG GCTACCGCGT GAAAGCAACC ATTTCGCCTT ACATGCAGGA CGATAAGGAG
GTAACCGTTA AATATACTGA CGGATCGAGC GAGAAATACG AGAAATACGG TTATGCCAAC
TTCTCCGTGG AAGGTCAGGC GCAAAAGCTG CTGCTATTGA AGAGCGAAGG CACCATTTCC
GTGCTTTTCC GCGATGCCAC CAGCGGCAAG GAAACCTACG GCGGCGGCCG CTACCTCGAT
TATCCCGTGG ACCAGATCAA AAACAACACC ATTGTGCTCG ACTTCAACAA GGCGTATAAC
CCCTATTGTG CGTACCAGGA AAGCTACGCC TGCCCGGTGC CTCCTGCCGA AAACACGCTG
AGCGTAGCCA TTCAGGCAGG CGAAGTGACC GAGGAGGCTT CGCACCAGGA ATAA
|
|---|
| Protein sequence | MFKNKVIRYS TIAMFIAILA YLIIENMGGS SSSDDAVAAN PALYKTKLLE ERAAKDEQFK
TGDDSPIKDK DSFHGLHYFE PNLGYRVKAT ISPYMQDDKE VTVKYTDGSS EKYEKYGYAN
FSVEGQAQKL LLLKSEGTIS VLFRDATSGK ETYGGGRYLD YPVDQIKNNT IVLDFNKAYN
PYCAYQESYA CPVPPAENTL SVAIQAGEVT EEASHQE
|
|---|
| |