Gene Dfer_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0004 
Symbol 
ID8223569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3266 
End bp4288 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content48% 
IMG OID644927883 
Productaminopeptidase 
Protein accessionYP_003084441 
Protein GI255033820 
COG category[R] General function prediction only 
COG ID[COG4324] Predicted aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0290521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0636966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTGCCC TGCTGGTTAT CGTCGTGTTG CTGGGCGTTT GGCAAAGGGA AGTGCTAACC 
TATGCTTTTT TACAAGCCAA AGGACAGATT GGCATACTGA TGCAAGTGGA GGACGTGCCC
GACGTGCTGA GCGACGAATC GTTCCCCGAC TCCCTCAAAG CGAGAATCCG GCTCATTCAG
GAGATCAAGA AATTTGGTGT GGACTCGCTC GGACTGACAC CGTCTGATAA TTATACCACG
TTCTACAATC AGCACGGCCG GCCGCTTATC TGGCTCATCA CCGCTTCCGA AAGATATAAG
GTGCAGCCGC ATCAGTGGCA TTTCCCCATT GTAGGCACTT TTCCATACAA AGGTTACTTC
GATTCCACCC GCGCCGTAGC GGAAGAAAAG GCACTGATCG ACAAGGGATT AGATACAGAC
ATCGGCGAGG TATCCGCATG GTCTACATTG GGTTATCTCA AAGATCCGAT CCTTTCCAGC
ATGCTCCGGC GGCGTGATGG CAGTCTTGCC AACCTCATAT TGCACGAGCT TACACATGGT
ACGCTTTTTG TGAAAAACAA CCTGGAACTC AATGAAAACC TGGCCAGCTT TGTAGGCGAT
CAGGGCGCTA TACGGTTTTT GAAATACAAA TACGGCGCGG AATCCGAGCA AATGCGGCAG
TATGAGTATT CGAAACGTTA TAATGACGCC TATTCGCAGC ACATGCTTAG GGGTGCGGGG
CGTTTGGATA GTCTTTATAA GACATTCGGC CCTGATCCCA CGCCGGACGC TCACCGGGAT
TCATTGAAAA CCAAGTTGAT TACTGATATC GTAAATGACA CGGACACACT TCTTTCAGGC
AAGCGCACGT TAACAAACAA AAGCCGCTGG CCCGACGGAA AACTTCCCAA TAATGCTTAC
TTTATCAGCT ACCTGACCTA TAAGTCGAAA CAGGACACTT TCAGGCAGGA ATTTGAACAG
AAGTTTGGGA AGGATTTAAA AAAATACTTG AACTATTTAA AGGGCAAATA CCCTTCCCTG
TAA
 
Protein sequence
MLALLVIVVL LGVWQREVLT YAFLQAKGQI GILMQVEDVP DVLSDESFPD SLKARIRLIQ 
EIKKFGVDSL GLTPSDNYTT FYNQHGRPLI WLITASERYK VQPHQWHFPI VGTFPYKGYF
DSTRAVAEEK ALIDKGLDTD IGEVSAWSTL GYLKDPILSS MLRRRDGSLA NLILHELTHG
TLFVKNNLEL NENLASFVGD QGAIRFLKYK YGAESEQMRQ YEYSKRYNDA YSQHMLRGAG
RLDSLYKTFG PDPTPDAHRD SLKTKLITDI VNDTDTLLSG KRTLTNKSRW PDGKLPNNAY
FISYLTYKSK QDTFRQEFEQ KFGKDLKKYL NYLKGKYPSL