| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0001 |
|---|
| Symbol | |
|---|
| ID | 8229421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2 |
|---|
| End bp | 1444 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644927881 |
|---|
| Product | chromosomal replication initiator protein DnaA |
|---|
| Protein accession | YP_003084439 |
|---|
| Protein GI | 255033818 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0206444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0774659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTAAATT ATACATTGGA AAGAATCAGC ACAAATAGAG AGGTAGACCA GGTTTGGGAT
GCTTGCCTGA GGATTATTCA GCAGCATATT CCAGAGCAGA GTTTTAAGAC GTGGTTTGAA
CCCATTCGTC CCTTAAAACT CTATGGTAAA GTACTTACCG TGCAGGTTCC CAGCCAGTTT
TTCTACGAAT GGCTGGAAGA TAACTATGTT AATCTGCTGA GAAAGGCGCT GGATTACGCG
ATCGGTCGCG ATGGATTATT GGAATATTCC ATTATTGTCG ACACCGGTAA CGAGAAGCAC
CAGCCGCTGA CGATGAACGT CTCAACCCAG AAATCTCCAA ATTATTCCAA ACCGGATAAT
TTCTCCACCG ACCCCAGAAT GGGCGCTACG GTGCGGGAAA AAGACCAGGA TTCTCTGACG
CTCGACACGT ATCTGAACCC GAATTACTCT TTCGATAATT TTATCGAGGG AGATTGTAAC
CGTCTGGCAC GTTCGGCCGG TTTCGCGGTA GCGCAGCGTC CGGGGCTCAC GTCGTTCAAT
CCGCTGATGA TGTACGGCGG CGTAGGGCTT GGCAAAACAC ACCTCGTGCA GGCGATCGGG
AATTATATTA CCAACCATTA CGAAAACAAG CTGGTACTAT ACGTTTCTTC TGAGAAATTT
ACCAACCAGT TCATCAACTC GATCCGGAAC AACACGTTGC AGGAGTTCAC CGATTTTTAC
ATGAAAGTGG ATGTGCTGGC GATCGACGAC GTGCAGTTTT TGTCGGGTAA GGAAAAAACG
CAGGATACGT TCTTCCATAT TTTCAACCAC CTGCATCAGC TCGGCAAGCA GATCATCATG
ACGAGTGACC GCCCGCCGCG TGAGCTGCAA GGCTTGCAGG ACCGCTTGCT ATCCCGCTTC
AAATGGGGAC TTACCGCCGA TTTGCAGGCG CCGGATTTCG AAACGCGTAT CGCGATCATC
CAGAAAAAGA TCCAGTCGGA AGGTATTTCG ATTGATTATG ACGTGATCGA ATACATCGCG
CATAGTGTGA ATTCCAACGT AAGGGAGCTC GAAGGCGTGA TCGTTTCGCT GATGGCGCAG
GCGTCGCTTA CCCGCCGGAA TATCGACGTA GAACTGGCCA AAAACACCCT TCGCAACATC
GTCATGAACG AGGATAAGGA GGTTACGATC GACACCATTC AGGAAATCAT CGCCGATTAC
TTCCAGGTTT CCATCGCCGA CCTGAAAAGC AAAAGCCGCA AAAAGGAGGT CGTTTACCCG
CGCCAGCTGG CGATGTACCT CGCCAAGGAA TACACCGATC TGCCGCTCAA ATCCATCGGT
TACCATTTCG GCGGCCGCGA CCACAGCACG GTAATCCATT CGATCCAAAG CATTAACCTG
CTCATGGACG AAACCCCGGA CGTGGAAGAA ACTTTGCAGA AACTTCGCAG TTACTTTAAG
TAG
|
|---|
| Protein sequence | MVNYTLERIS TNREVDQVWD ACLRIIQQHI PEQSFKTWFE PIRPLKLYGK VLTVQVPSQF
FYEWLEDNYV NLLRKALDYA IGRDGLLEYS IIVDTGNEKH QPLTMNVSTQ KSPNYSKPDN
FSTDPRMGAT VREKDQDSLT LDTYLNPNYS FDNFIEGDCN RLARSAGFAV AQRPGLTSFN
PLMMYGGVGL GKTHLVQAIG NYITNHYENK LVLYVSSEKF TNQFINSIRN NTLQEFTDFY
MKVDVLAIDD VQFLSGKEKT QDTFFHIFNH LHQLGKQIIM TSDRPPRELQ GLQDRLLSRF
KWGLTADLQA PDFETRIAII QKKIQSEGIS IDYDVIEYIA HSVNSNVREL EGVIVSLMAQ
ASLTRRNIDV ELAKNTLRNI VMNEDKEVTI DTIQEIIADY FQVSIADLKS KSRKKEVVYP
RQLAMYLAKE YTDLPLKSIG YHFGGRDHST VIHSIQSINL LMDETPDVEE TLQKLRSYFK
|
|---|
| |