| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_4037 |
|---|
| Symbol | |
|---|
| ID | 8139411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4620828 |
|---|
| End bp | 4622336 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644871653 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_003023811 |
|---|
| Protein GI | 253702622 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.00278502 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCA AAGCGGAAGA AATCAGCGAG ATTATCAGGA AGCAGATCAA GGAATACGGC
ACTGAAGTAG CTGTTGCCGA AACGGGGACC ATTATCTCCA TCGGCGACGG TATCGCACGT
ATCCACGGTC TTGACAAGGC GATGGCAGGC GAGCTCCTCG AGTTCCCCGG CGGCATCACC
GGCATGGTTC TGAACCTCGA GGAAGACAAC GTCGGCGCGG CGATCCTCGG CGAGTTCTCC
GAGATCAAGG AAGGTGACTC GGTCAAGCTG ACCGGCAAGA TCGTCGAGGT TCCGGTAGGC
CCGGCCCTGA TCGGCCGCGT GGTCGACGCG ATCGGTAACC CGATCGACGG CCTCGGCCCG
ATCAACACCG ACACCTTCGG CAAGGTGGAA GTGAAGGCCC CCGGCATCGT CAAGCGTAAG
TCGGTGCATC AGCCGATGCA GACCGGCCTC AAGGCGATCG ACTCCATGGT TCCGATCGGG
CGTGGACAGC GCGAGCTGAT CATCGGCGAC CGTCAGACCG GCAAGACCGC CGTCGCGATC
GACACCATCA TCAACCAGAA GGGTGGCGAC GTGGTCTGCA TCTACGTCGC AATCGGCCAG
AAGCGCTCCA CGGTCGCCCA GGTTGTTTCC AAGCTGAAAG AGCACGGCGC CATGGATTAC
ACCATCGTCG TCGCCGCAAC CGCCTCCGAG CCGGCACCGC TGCAGTTCAT CGCACCGTAC
ACCGGCGTCA CCATGGGCGA GTTCTTCCGC GACTCCGGCA AGCACGCCCT CATCATCTAC
GATGACCTCT CCAAGCAGGC CGTCGCTTAC CGCCAGCTCT CCTTGCTCCT TCGCCGTCCG
CCGGGGCGCG AAGCCTATCC GGGCGACGTC TTCTACCTGC ACAGCCGTCT CCTCGAGCGT
GCCTGCAAGG TTTCCGACGA CTGCGGCGCC GGCTCCCTGA CGGCTCTCCC GGTCATCGAG
ACCCAGGCGG GCGACGTTTC CGCGTACATC CCGACCAACG TGATCTCGAT CACCGACGGC
CAGATCTACC TGGAGAGCGA CCTGTTCTAC TCCGGCGTAC GTCCCGCCAT CAACGTCGGC
CTCTCCGTTT CCCGCGTCGG CGGCTCGGCT CAGGTTAAGG CGATGAAGCA GGTCGCAGGT
ACCCTCCGTC TGGCACTGGC TCAGTACCGC GAGATGGCGG CCTTCGCCCA GTTCGGCTCC
GACCTGGACA AGGCTACCCA GATGCAGCTC GCCCGCGGCG CACGCCTGGT CGAGATCCTG
AAGCAGCCGC AGTACCGTCC GATCCCGAAC GAGAAGCAGG TCCTGATCAT CTTCGCTGCC
AACAACGGCT TCGTCGATGA GTACCCGATC GGCTCCCTCG GCCGCTACGA GACCGAACTC
TACGCATTCT TCGACTCCAG GAAGGCGACT CTCCTGGGCG AACTGCGCGA CAAGAAAGCG
ATCGACGACG CCATGAAGGG CGAGATCATC GCTTCCCTCG AAGAGTTCAA GAAGGAATTT
ACTGCCTAA
|
|---|
| Protein sequence | MEIKAEEISE IIRKQIKEYG TEVAVAETGT IISIGDGIAR IHGLDKAMAG ELLEFPGGIT
GMVLNLEEDN VGAAILGEFS EIKEGDSVKL TGKIVEVPVG PALIGRVVDA IGNPIDGLGP
INTDTFGKVE VKAPGIVKRK SVHQPMQTGL KAIDSMVPIG RGQRELIIGD RQTGKTAVAI
DTIINQKGGD VVCIYVAIGQ KRSTVAQVVS KLKEHGAMDY TIVVAATASE PAPLQFIAPY
TGVTMGEFFR DSGKHALIIY DDLSKQAVAY RQLSLLLRRP PGREAYPGDV FYLHSRLLER
ACKVSDDCGA GSLTALPVIE TQAGDVSAYI PTNVISITDG QIYLESDLFY SGVRPAINVG
LSVSRVGGSA QVKAMKQVAG TLRLALAQYR EMAAFAQFGS DLDKATQMQL ARGARLVEIL
KQPQYRPIPN EKQVLIIFAA NNGFVDEYPI GSLGRYETEL YAFFDSRKAT LLGELRDKKA
IDDAMKGEII ASLEEFKKEF TA
|
|---|
| |