Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_4034 |
Symbol | atpC |
ID | 8139408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4617971 |
End bp | 4618387 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644871650 |
Product | F0F1 ATP synthase subunit epsilon |
Protein accession | YP_003023808 |
Protein GI | 253702619 |
COG category | [C] Energy production and conversion |
COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.0000113371 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGAAA AACTGAAGGT TGAACTGGTA ACCCCGTACA AGAAGGTCCT CTCCGAAGAG GTCGACGAGA TCACCGCGAC CGGTGCCCTC GGCGAATTCG GCGTTCTGCC GGGCCACGCT CCCTTCCTCA CCTCGCTGAA GATCGGCGAG CTGGCCTACA GAAAGGACGG CGTGTCGCAT CACATGGCAC TGAACTGGGG CTACTTCGAA GTCGAGAACG ACACCGTGAC GGTGCTGGTC GAGACCGCTG AGAAGGCGGA CGAGATCGAC CTGGAGCGCG CCAAGGCGGC GCTTGGGCGC GCCGAGGTCG AGCTGAAGGC CCTGACCCCG GAGGACAAGA ACTTCCGGAT CTACGAGGCC GCGCTCGAGC GCGCTCTGAT CAGGGTCCAG GTCGCCGGCA AGGCGACCAG ACGCTAA
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Protein sequence | MAEKLKVELV TPYKKVLSEE VDEITATGAL GEFGVLPGHA PFLTSLKIGE LAYRKDGVSH HMALNWGYFE VENDTVTVLV ETAEKADEID LERAKAALGR AEVELKALTP EDKNFRIYEA ALERALIRVQ VAGKATRR
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