| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_4033 |
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| Symbol | |
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| ID | 8139407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 4616438 |
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| End bp | 4617814 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644871649 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003023807 |
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| Protein GI | 253702618 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.00000078929 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCACG GCCACGAGCT GCTGCACCAA CCGATCCCGG GGTTGATCAG GAAACTGGCC
GTTCCCACCA GCGTCGGCTA TTTCTTCAAC ACCATGTTCA ACGTGGTCGA CACCTTCTAC
GGCGGAAGGG TCTCCACCGA GGCGCTCGCC GCACTTTCCC TTTCCTTTCC CATTTTCTTC
CTCATCATCG CCATCGGCGC CGGGATCTCC ACCGGGGCGA CCGCGCTCAT AGGCCACGAG
CTCGGCGCGG GCAACGCCGA AGAGGCGCGG CACCTGGCGG GACAGACCAT CTCCTTCGGC
ATCGTGCACG GCGTACTGGT CGCGGCGGTC GGCTTCTCGG CCGCTCCGCT GCTCTTCCAG
CTCCTGGGCG CCAAAGGGGC TGTCTTGCAG CTCGCGCTGC AGTACATGGA CACCATCTTC
ATCGGGAGCA TCTTCTTCCT GATCAACTAC GTGTTGAACT CCATCCTGAA CGCGACCGGC
GACAGCCGCA GCTTCCGTAA CTTCCTGGTC GTCGGGTTCT TCCTCAACCT CGTCTTCGAC
CCCTGGTTTC TCTACGGCGG GCTCGGGGTG CCGGCGCTGG GGATATCCGG CATAGCCTGG
GCCACCATAC TGATCCAGGC CATCGGTAAC TGTTATCTGG CGGCGAGGGT CAGGCAGTCG
GGGATGCTGG AGGGCTTCCG CTGGAGGGAG CTTATTCCCA GCCGGCACGC TTACTCCCAA
CTGGCCCGGC AGGGGTTTCC CTCCAGCCTC AACATGATGA CCGTCGCCAG CGGCATCTTC
CTGATCACCT GGTTCGTCGG GCGCTTCGGG AGCGAGGCGG TGGCGGCTTA CGGTATCGGC
TCCCGGATCG AGCAGATCGC GCTCCTTCCG GTGATGGGGA TGAACGTGGC GACGCTCGCG
CTTGTGGCGC AAAACAGCGG GGCCAGGCAG TTGGAGCGGG TGGTGCAGAC CATCAAGACC
GCGCTGCGGG TAGGGGTGGC GCTGATGGGC GCCGGAACGG TGGTCGTGTT CCTTGCGGCC
CGGCCGCTGA TGGGGCTATT CAGCAACGAC CCCAAGGTGG TGGAGATAGG GGTCGGCTAT
CTCAGGATCG AGTCCTTCGT CTTCATGGCC TACGTCATCC TCTACACCTG CGTCGCCGTG
CTTCAGGGGT TGAAGAGGCC AGGGTTTGCC CTGATGATCG GGTTGATGAG GCAGATCGTT
TTCCCCCTTC CGGTCTTCTA CCTCCTGGCG GTGTTCTTGG GGTTCGGTCT CACCGGGATC
TGGTGGGGAA TACTGCTGGT GACCTGGGGA GCCGCCTGCG TCACCGTCGT GTACGTGCTG
CGGCTGGCGG CAGGCATGAG CCCCGCCGGC GCTGGGCTGG AGAGGGCTGC CGACTGA
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| Protein sequence | MNHGHELLHQ PIPGLIRKLA VPTSVGYFFN TMFNVVDTFY GGRVSTEALA ALSLSFPIFF
LIIAIGAGIS TGATALIGHE LGAGNAEEAR HLAGQTISFG IVHGVLVAAV GFSAAPLLFQ
LLGAKGAVLQ LALQYMDTIF IGSIFFLINY VLNSILNATG DSRSFRNFLV VGFFLNLVFD
PWFLYGGLGV PALGISGIAW ATILIQAIGN CYLAARVRQS GMLEGFRWRE LIPSRHAYSQ
LARQGFPSSL NMMTVASGIF LITWFVGRFG SEAVAAYGIG SRIEQIALLP VMGMNVATLA
LVAQNSGARQ LERVVQTIKT ALRVGVALMG AGTVVVFLAA RPLMGLFSND PKVVEIGVGY
LRIESFVFMA YVILYTCVAV LQGLKRPGFA LMIGLMRQIV FPLPVFYLLA VFLGFGLTGI
WWGILLVTWG AACVTVVYVL RLAAGMSPAG AGLERAAD
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