Gene GM21_3981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3981 
Symbol 
ID8139355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp4563453 
End bp4564049 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content59% 
IMG OID644871597 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003023755 
Protein GI253702566 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.000000890193 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAAAA CGGAATGCCA CAAGAAGCTT ATGGAGGTGG GGACGCAGCT GTTCTCGGAG 
AGGGGGCTGA AGGGGGTAAG CATCCGGGAA CTCTCCCTCG CGGCGGGGAC CAGCATCTCG 
ATGATCTCCT ACCATTTCGG CAGCAAGGAA GGGCTCTATC AGGCGGTGTT GCAGCAGCAG 
TTCGCCTGCT TCAAGGAAAT CCATGAGATC AGGCAGCGCG TGACGGACCC GGTTGAGATG 
ATAAAGAGCT ATCTGCTCTG GACCTTCGGG CGCCACAGAA ACAACCCGTA CCTGCTCCGC 
TTTTACACGA GCGAACTGAC CAACCCGACG GCGTTTTTCG AGCCCTTGGT CATGCCGGTA 
ATCGACGAGG TCATCGTGAT CATGGCGGGG GCGATCGAGG AGGGGATCCG GCAGAAGAAG 
TTCCGGGAGG ATGTCGATCC CACCAACGCG GCCCTGGCGC TGGCGGGGAT GGTGAATTAC 
TTCTTCCTGA GCAGCCTGGC GACCAGGAAC CTGATCAACC ATTCCCCTGA AAAGGACGAG 
ATGCTGGTGC AGCAGTACCT GGACATCTTC ACGCGGGGGA TCGGCGCCTG CGGATGA
 
Protein sequence
MEKTECHKKL MEVGTQLFSE RGLKGVSIRE LSLAAGTSIS MISYHFGSKE GLYQAVLQQQ 
FACFKEIHEI RQRVTDPVEM IKSYLLWTFG RHRNNPYLLR FYTSELTNPT AFFEPLVMPV 
IDEVIVIMAG AIEEGIRQKK FREDVDPTNA ALALAGMVNY FFLSSLATRN LINHSPEKDE 
MLVQQYLDIF TRGIGACG