| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3880 |
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| Symbol | ispD |
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| ID | 8139254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 4466672 |
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| End bp | 4467367 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644871497 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_003023655 |
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| Protein GI | 253702466 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAGGA TTTTCGCGCT GATACCGGCC GCCGGAATGG GCAAAAGGAT GGGTGCCGGC
TCCAACAAGC AGTATCTGCT GCTGGACGGC ATGCCGATTC TCGCCCGCAC CGTCGCTGTT
TTCGAGTCGG CACCCTTCAT AGACGGGATC TACCTGGTTT CGCCGGAGCA GGAGATCCCG
TTTTGCCGCA GCGAGGTGGT CGACCGCTAC CGCTTCACCA AGGTCCGCGC CATCGTCCCC
GGCGGGGCCG AGCGGCAGCA CTCGGTCTGC AACGGCCTGA ACGCCATGAG TGACGCAGCT
TCCGACGACC TAGTGCTGAT CCACGACGGG GTGCGCCCTT TCGTTTCGCA AGAGATGCTG
CAAGCCGCCG CCGACGCTGC CCGGGAACAT GGAGCATCCG TGGTCGCGGT CCCGGTGAAG
GACACGGTGA AGGTGGTGAA AGGCGGCGTT ATCGCCGAAA CGCCGCCCCG CGAAAAGCTC
TGGCTGGCGC AGACGCCGCA GGCTTTCCGC TACGGCCTGA TCCGCGACGC CCACGCGCGT
GCAAAGGCGG AAGGGTATCT GGGAACCGAC GACGCCTCCC TCATCGAGCA TCAGGGGGGA
GAGGTGCGCA TCGTCACCGG CGACTACCGC AACATCAAGA TCACGACGCC CGAGGACCTG
GTTCTTGCCG AGGCGTTTCT GAAGGGAAAG GGATGA
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| Protein sequence | MSRIFALIPA AGMGKRMGAG SNKQYLLLDG MPILARTVAV FESAPFIDGI YLVSPEQEIP
FCRSEVVDRY RFTKVRAIVP GGAERQHSVC NGLNAMSDAA SDDLVLIHDG VRPFVSQEML
QAAADAAREH GASVVAVPVK DTVKVVKGGV IAETPPREKL WLAQTPQAFR YGLIRDAHAR
AKAEGYLGTD DASLIEHQGG EVRIVTGDYR NIKITTPEDL VLAEAFLKGK G
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