Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3876 |
Symbol | |
ID | 8139250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4461968 |
End bp | 4462738 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644871493 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003023651 |
Protein GI | 253702462 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 0.883338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGC GCGTATTCGT CCACGTCCCC TACCTGCAGA TCGAGCAGCA TCTCCCCTTC ATCCTGGAGC GCCGGCTCAA CCCGGAGATC TTCTTTTCCG CCGACGCCCT GGACGCGCTG GCGCCGTCGC AACTTGCCGC CACTGCGGAT GCGCTAAAAG GCGCGGGGCT TTGCTGCACC ATCCACGCGC CGTTCATGGA TCTCAACCCG GGCTCCTTCG AGAAGATGCT GAGGGCCGCC ACGGTGCGCC GCTTCCAGCA GGTGCTCGAT GCGGCGCAGA CCCTGCGTCC CGAGGTGATG GTGTTTCACC CGGGATTCGA CCGCTGGCGC TACGGCGAGG CGGCCGCGCA GTGGCTCGAA CTGAGCGTCG CGGTCTGGCG GGAGGTGCTG CTGCGGGTGG AGGAGATCGG CACTGTCGTC GCGGTCGAGA ACATCTTCGA GGAGGAGCCC TCGACCTTGA AGGCGCTGTT CGAGGCGGTG GAGCACCCCC GCTTCGGGCA CTGTTTCGAC GTGGGGCACT GGAACCTGTT CAAAAAGGTG GGGATGGCCG AGTGGTTCGA GGCACTTGGG GGGAGGATCG CCGAGGTGCA TATCCACGAC AACGGCGGCA CCCGCGACGA GCATGCCCCT CCAGGCGAAG GTGGGATCGA CTTCAAGCAG TTCTTCGACC TGATGGAGCG CTACGCCCCC GACGCGGCCT ACACCATCGA GGCGCACAGC ATGAAGGATC TGGAGAGCTC GCTTGAGGCG CTCAAGCCTT ACCTGGGGTA G
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Protein sequence | MTKRVFVHVP YLQIEQHLPF ILERRLNPEI FFSADALDAL APSQLAATAD ALKGAGLCCT IHAPFMDLNP GSFEKMLRAA TVRRFQQVLD AAQTLRPEVM VFHPGFDRWR YGEAAAQWLE LSVAVWREVL LRVEEIGTVV AVENIFEEEP STLKALFEAV EHPRFGHCFD VGHWNLFKKV GMAEWFEALG GRIAEVHIHD NGGTRDEHAP PGEGGIDFKQ FFDLMERYAP DAAYTIEAHS MKDLESSLEA LKPYLG
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