| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3848 |
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| Symbol | |
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| ID | 8139222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 4431343 |
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| End bp | 4432095 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644871465 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_003023623 |
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| Protein GI | 253702434 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.0000368687 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTGTC TTCTTAAGGC GTACGAGAAC GAGGCGCAAC GCGGGGTGCC GATGAGCAGG
GACGAACTGG TGGTCACCCA CCTCCCCTTG GTGAAGTTCA TCGTGGACCG GATCGCCTCT
TCGCTTCCCC CGCACCTGGA CCGCGACGAT CTGAGGAGCG CCGCGGTGAT CGGGCTGATA
TCCGCCGCCG AGCGCTTCGA TCCCGCCCGC GGTGTGCAGT TCAAGACCTT CGCCGAGCAG
CGCATCCGCG GCACCATCAT GGACGAGCTG AGGGCGCAGG ACTGGCTCAC CAGGAGCCTC
AGGGACAAGT TCAAGAAACT GGAGCGCGAG TTCTCGCAAC TGGAGCAGCG CCTGGGGAGG
AACCCCTCCA GCGACGAGGT GGCGCTCGCC ATGGGGCTGG AGCTGAAGGA CTACTTCCGG
CTCCTGGAGG AGATCCACCT CCTCTCCTTC GTCTCCCTCG ACGACGCCTG GCACGACGAG
GACGGCGCTC CCTTCGGGCT TCTGGACGTC CTGGAGGACA AGGGGACCGA GAGCCCGCAG
AGCCAGCTGA TCGCGCGCCA GACCGTGGAG CGCCTGGCCG AGGCGATCGA CGCCCTGCCG
GAGAAGGAGC GCATCGTGGT CACGCTCTAC TACTACGAGG AGCTGAACTT GAAGGAGATC
GGCGCCGTCC TGGACCTCAC CGAATCGAGA ATCTCGCAGC TGCACAGCCA GGCCATCATC
AGGCTGCGCG GCAAGATGAA GCGCCTGGGC TAG
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| Protein sequence | MNCLLKAYEN EAQRGVPMSR DELVVTHLPL VKFIVDRIAS SLPPHLDRDD LRSAAVIGLI
SAAERFDPAR GVQFKTFAEQ RIRGTIMDEL RAQDWLTRSL RDKFKKLERE FSQLEQRLGR
NPSSDEVALA MGLELKDYFR LLEEIHLLSF VSLDDAWHDE DGAPFGLLDV LEDKGTESPQ
SQLIARQTVE RLAEAIDALP EKERIVVTLY YYEELNLKEI GAVLDLTESR ISQLHSQAII
RLRGKMKRLG
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