| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3788 |
|---|
| Symbol | |
|---|
| ID | 8139162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4361788 |
|---|
| End bp | 4362465 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644871407 |
|---|
| Product | exsB protein |
|---|
| Protein accession | YP_003023565 |
|---|
| Protein GI | 253702376 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
|---|
| TIGRFAM ID | [TIGR00364] exsB protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 123 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAA AGGCGGTAAT CCTTTACAGC GGCGGGCTCG ATTCGACCAC CTGCCTCGCC
ATAGCGAAGA AGCAGGGTTT CGCACCCTAC GCCCTCAGCT TCAGCTACGG GCAACGGCAC
CAGCAGGAAC TGGAGGTGGC GAAGCTGAAC GCGCGCCCGA TGGGGGCCGT GGATCACCTG
CTGGTCGAGT TCGACCTGAG AAAGATGGGA GGGAGCGCCC TCACCTCCGA TATCGAGGTC
CCGAAGGAGG GAGTAGGGGA GGAGATACCG GTGACCTACG TGCCGGCCCG CAATACGATC
TTCCTCTCCT TCGCGCTTGG CTGGGCGGAG ACGCTTGACT GCTTCGACAT CTTCATCGGC
GTCAACGCGC TCGATTACTC GGGCTACCCC GATTGCAGGC CCGAATTCAT CTCGGCCTAC
GAGACGATGG CGAATCTTGC CACCAAGGCC GGGGTCGAGG GGAAACGGTT GCAGATCCAC
ACCCCCCTGA TCAGCCTAAC CAAGGCGGAG ATCATCCAGA AGGGGATTTC GCTAGGAGTC
GACTACTCCA AGACCCACTC CTGCTACGAC CCCGCCGAAG ACGGCGCGGC CTGCGGCCGG
TGCGATTCCT GTCGTTTGCG GCTCAAAGGT TTCGCCGAAG CCGGGGTAAC CGACCCGGTA
AGGTACCAGA AGCTTTAG
|
|---|
| Protein sequence | MQKKAVILYS GGLDSTTCLA IAKKQGFAPY ALSFSYGQRH QQELEVAKLN ARPMGAVDHL
LVEFDLRKMG GSALTSDIEV PKEGVGEEIP VTYVPARNTI FLSFALGWAE TLDCFDIFIG
VNALDYSGYP DCRPEFISAY ETMANLATKA GVEGKRLQIH TPLISLTKAE IIQKGISLGV
DYSKTHSCYD PAEDGAACGR CDSCRLRLKG FAEAGVTDPV RYQKL
|
|---|
| |