| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3738 |
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| Symbol | alaS |
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| ID | 8139112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 4306605 |
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| End bp | 4309232 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644871357 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003023515 |
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| Protein GI | 253702326 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 127 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCA AAGAGATCCG GGCTCAGTTC TTCAACTTCT TTCAGAAAAA AGGGCATGCC
CTTGTGGAGA GCTCGAACCT CATCCCACGC AACGACCCTA CCCTCCTCTT CACCAACGCC
GGGATGAACC AGTTCAAGGA CGTCTTCCTC GGCATGGAGA AAAGGGAGTA CCTGAGGGCG
GTCTCCTCCC AGAAATGCGT GCGCGCCGGC GGCAAGCACA ACGACCTGGA AAACGTGGGG
CGCACCGCCA GGCACCACAC CTTCTTCGAG ATGCTGGGGA ACTTCTCCTT CGGCGACTAC
TTCAAGAAGG AGGCGATCGG CTTCGCCTGG GAGTTCCTGA CCAAGGAACT CGGCCTCTCC
AAGGACCGCC TCTACGTCAC CGTCTACACC GACGACGACG AGGCGGCCGA CATCTGGCAC
AACCAGGAAG GGGTGCCGCG CGAGCGCATC TACCGCTTCG GCGAGAAGGA CAACTTCTGG
TCCATGGGCG ACACCGGCCC CTGCGGCCCC TGCACCGAGA TCTTCTGGGA CAACGGCCCG
GGAACCGGCT GCGGCAGCCC CGACTGCGCG GTAGGCTGCG ACTGCGACCG CTACATGGAG
ATCTGGAACA ACGTCTTCAT GCAGTTCAAC CGCGGCAAGG ACGGCGTGCT GGCCCCGCTC
CCCAAACCTT CCGTCGACAC CGGCATGGGC CTTGAGCGCA TCTCGGCCGT CATGCAGGGG
GTCACCTCCA ACTACGACAC CGACCTTTTG CAGGGAATCA TCCGCCACAT CGAGAAGGTC
TCCGGGAAGA AGTACCGGGA CGACGAGAGG GACGACGTCT CCATGCGCGT CATCGCCGAC
CACGCCCGCG CCGTCACCTT CCTGATCTGC GACGGCGTCC TTCCCAGCAA CGAGGGACGC
GGCTACGTGC TCAGGCGCAT CATGCGCCGC GCCGCCCGCC ACGCGAAGAT GCTGGGAATC
GCCGAGCCGG TGCTCTTCCG GGTCGTCGAC GCGGTGAACA TGATGATGTC CGACGCCTAC
CCGGAGCTTC TGGAGCGCGA GCAGTACGTG AAGAAGGTGA TCCTGGCCGA GGAGGAGCGC
TTCATCGAGA CGCTCGACCG CGGCCTCGCC ATCTTGAACG AGGAGACGGC GGCGCTCAGG
GCCAAGGGGG AGAAGGTCAT CTCCGGCGAG ATCATCTTCA AGCTCTACGA CACCTTCGGC
TTCCCGGTCG ATCTCACCGC CGACATCGTC GAGTCCGAAG GGTTCACCCT CGACGAGGAC
GGCTTCGCCC TCTGCATGGA GAAGCAGCGC GTCAAAGCGA GGGAGAACTG GAAGGGATCC
GGCGAGCAGG GGCTGGCCGA CATCTACAAG GAGCTGCACG GCACCGGCAT CACCACCGAC
TTTTTGGGCT ACAGCGAGCA GACCGCCTTC TCCACCATCA GCGCCATCGT CAAGGGGGGG
ACCCTGGTCG AGGAGGCCGG CGCCGGCGAA GAGGTCGAGA TCGTCACCGC GGCGACGCCG
TTCTACGGCG AGTCGGGGGG GCAGGCCGGC GACACCGGAA CCATCTCCAC CGGCTCCGGC
CACGTCGAGG TGACCGGCTC CACCCGCCCC TTCACCGATC TCATCGTGCA CCGAGGCCGC
GTGGTCTCCG GCGCCGTCAG AACCGGCGAG GCGGCGGACC TGAAGATCAC GGTCGCTCAC
CGCGCCGCTA CCGCCAGAAA CCACACCGCG ACCCACCTTT TGCAGGCGGC GCTCCGGGAG
GTGCTGGGCG AGCACGTGAA GCAGGCAGGC TCCCTGGTGA CCCCGGACAG GCTCCGCTTC
GACTTCACCC ACTTCACCCC GATGACCCAG GAAGAGATCC GCAGGGTCGA GATCCTGGTG
AACGGCCACA TCATGGGGAA CTCCCCGGTG GAGGCCCGCG AGATGCCGGC GACGGACGCG
CTTGCCGCGG GCGCCACCGC CCTTTTCGGC GAGAAGTACG GCGACGTGGT CCGCGTGGTC
AAGGTAGGCG AGGTCTCAAG CGAACTCTGC GGCGGCACCC ACGTCCACGG CGCCGGCGAG
ATCGGCTTCT TCAAGATCAT CTCCGAGGCG GGGATCGCCG CCGGGGTTAG GAGGATCGAG
GCCCAGACCG GCAGCGGCGC CCTGGCCGTA GTGCATGGGA TGGAGGACGA GCAGCGCGGC
ATCGCGACCC TTCTGAAGGC GGAAGGGGGG ACCGTCCTGG ACAAGGTCGA GAAACTGGTG
GCCGGCCAGC GCGAGCTGCA AAAGGAGCTC GAAACGCTGC AGGCGCGCCT GAACGCCTCC
AAGTCCGCCG ACCTGATCCA GCAGGTGCGC GAGCAAAACG GCGTGAAGAT CCTGTCGGTG
AAGGTCGAAG GGGACGCCAA GGGGTTGAGG GAACTCTCCG ACACGCTGAA GCAGCGCATC
GGCTCCGGCA TCATCGTCCT TGGGACCAGC GACGCGGCGA GGGCGAACCT CCTGGTGGCG
GTGACGGCCG ACCTCGCCGG GCGCTGGAAG GCGGGAGACA TCATCAAGGC CATCGCCCCG
ATAGTCGGGG GCAACGGCGG AGGAAAGCCC GAGCTGGCGC AGGCGGGAGG CTCGAAGCCC
GAGCACCTGG CCGAGGCGTT AGAGGCGGTG TACCAGATAG TGGGGTAA
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| Protein sequence | MTGKEIRAQF FNFFQKKGHA LVESSNLIPR NDPTLLFTNA GMNQFKDVFL GMEKREYLRA
VSSQKCVRAG GKHNDLENVG RTARHHTFFE MLGNFSFGDY FKKEAIGFAW EFLTKELGLS
KDRLYVTVYT DDDEAADIWH NQEGVPRERI YRFGEKDNFW SMGDTGPCGP CTEIFWDNGP
GTGCGSPDCA VGCDCDRYME IWNNVFMQFN RGKDGVLAPL PKPSVDTGMG LERISAVMQG
VTSNYDTDLL QGIIRHIEKV SGKKYRDDER DDVSMRVIAD HARAVTFLIC DGVLPSNEGR
GYVLRRIMRR AARHAKMLGI AEPVLFRVVD AVNMMMSDAY PELLEREQYV KKVILAEEER
FIETLDRGLA ILNEETAALR AKGEKVISGE IIFKLYDTFG FPVDLTADIV ESEGFTLDED
GFALCMEKQR VKARENWKGS GEQGLADIYK ELHGTGITTD FLGYSEQTAF STISAIVKGG
TLVEEAGAGE EVEIVTAATP FYGESGGQAG DTGTISTGSG HVEVTGSTRP FTDLIVHRGR
VVSGAVRTGE AADLKITVAH RAATARNHTA THLLQAALRE VLGEHVKQAG SLVTPDRLRF
DFTHFTPMTQ EEIRRVEILV NGHIMGNSPV EAREMPATDA LAAGATALFG EKYGDVVRVV
KVGEVSSELC GGTHVHGAGE IGFFKIISEA GIAAGVRRIE AQTGSGALAV VHGMEDEQRG
IATLLKAEGG TVLDKVEKLV AGQRELQKEL ETLQARLNAS KSADLIQQVR EQNGVKILSV
KVEGDAKGLR ELSDTLKQRI GSGIIVLGTS DAARANLLVA VTADLAGRWK AGDIIKAIAP
IVGGNGGGKP ELAQAGGSKP EHLAEALEAV YQIVG
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