Gene GM21_3734 details

Gene Information

• Locus tag: GM21_3734
• ID: 8139108
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 4301448
• End bp: 4303445
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644871353
• Product: multi-sensor signal transduction histidine kinase
• Protein accession: YP_003023511
• Protein GI: 253702322
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2205] Osmosensitive K+ channel histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 124
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGCACTTCG CACCGTTCCT ACTCATAGCC GTTTGCGAAC TGACGCTGCT CTTCATCGGG 
AGGAGCACCC CGCTGCCGGG GTGGCTGCAC CTCAGTGTCT CGGTCACGGT TGCCGCCGTG 
CTCCTCTTTG TCGCCGCCCG GGCCTGGAAA CGTCAGCTCC GCGTGCAGGA AGGGCTGCAG 
CGCGAGTTGG AGGGGATGCG GCAGGAAGCG GTGAAAAGCG CCCGCCGCTA CAAGAGCCTT 
TTGGAGGGGG CGGGTAACGC TATCTTCATC TTCAGCGCCG ACACCGGTCT TTTGGAGGAA 
GAAAACCGCG TGGGACGCGA GCTTTTGGGC TTCAACAAGG AGGAGCTCGA CTCCATCCAG 
GCGCGCGACC TGTTGCATCC CGACGAGCAT GAGCGGTTCC GCAGCTTCCT CTATCAGGTG 
AAGCGCAACG GGCGCGGGGA GCTGGACTCG GTGCGGATCA GGAAGAAGAA CGGCACCTTC 
TTCCTGGCCG AGATCAACGC CCGGCTCATC GACCTGGGGG ACGAGCAGGT GGCCCACTGC 
CTTATGCGCG ACATCACCAA GAAAAGGCGC ACCGAAAAAG AGATCTGGCA GCGAAACCGC 
GAACTTTCCA TCCTCAACGA CATCCTCACC GGCATGAACC ACTCCGCGGA CCTGGAACAG 
GAGCAGCATA GAACCCTGCT GGAGATCATG GAGCTCTTCG AGGCGGGGGG GGGCACGATG 
CACCTGTACC GCGGCGACCA GAAAAGCGCG CGGCTTTGCG CCAGTTGCTG CGTCTCTGCT 
GAGCTGGAGC AGCGCATCTC TCAAAGCCTC GCCCATGACC CGGAGCGCTT CCTGAAGGTG 
AAGAGGCTGA AGGCGCCGCA GGTGAAGGAG CTGGGCGCCG CCGCCGAGGG GTGGCAATGC 
TTCACCGCGG TCCCCATCAG CGCGCAGGAG CACCTGGTCG GCGTGATGCA CCTCATGCAT 
CGCGAGCCCT GCCGCCACAG CGCAGAAGAG CTCCGCTTCC TGGAAAGCGT CGGCAAGCAG 
ATGGGCAACA TCATCGAGAA AGGAAGGCTC TTCGCCGAGC TGAACTGGAA AAGCGGCGAA 
CTGCTCCGCT CGCACCGCCT TTTGGAGAAA AGCAGCCACA ACCTCTCCGT TTCCGAGATC 
CGGCTCAAGC AGAACCTGGC CCTGGTGGAG CAGGCCAACC TGGAGCAGAA CCGGCTGGAC 
CGGATGAAGA ACCAGTTCCT GGGGATGGTC TCCCACGAGT TCAACACCCC GCTCACCAGC 
ATCATCTCCG GCGTCGAGCA CCTTTTGCAA AACGGCTGGC ACAGCGAACA AGAAGCGCGC 
TCCGTGCTGG AACTGGTGCG GGACGGCGGG CTCAGGCTGA AGGGGCTGGT CGCGGACCTT 
TTGAAGCTGA TCAAGGTGGA GGCCAGGCGC GGCGCGCTGG AGACCTCGGC GGTGCACCTG 
CGGCATTTCC TGAGCGAACT CTCGGCGCAG TTGCAGCCGC AGTTGGAAGA GCGGGGCCAG 
CGCGTCACCC TGGCGGGGCT GGACGAGCTC CCCTACTTCG ACGCCGACCG CCACTACCTG 
GAACGGGTCT TCGGCGAGCT TTTGCAAAAC GCCATCAGGT TCAGCCCGCA CAGGGGCGAG 
ATTGTGGTTA CCGGGAAGGT GGTGGACCGT CCCGCGCTCC TGGAACGCAG GGAGACCCTG 
GAGCGCTTCA ACCCCGAGTT CCTCAGGCGC TGCGGCGATC GCTGCTACTT GGAAGTGGAG 
GTGCGGGACA GCGGCATCGG CATCCCGCCC GAGGAGCAGC AGGGGATCTT CGGGATCTTC 
TACGAGGTCG GCGAGATAAA GCACCACTCC AGCGGCATGA GCCGCGAGCA GGGAAGAGGG 
GCGGGGTTAG GTCTCGCCAT GGTGAAGGGG ATGGTGGAGG CCCACGGCGG GATGGTGTGG 
GTGGAGAGTG CGGGCGGAAG CTCCTTCTTC CTCGTCCTCC CCCTGGAGCA GGAAGCGATC 
CAGCCGGCCC TGTTCTGA 

 

Protein sequence

MHFAPFLLIA VCELTLLFIG RSTPLPGWLH LSVSVTVAAV LLFVAARAWK RQLRVQEGLQ 
RELEGMRQEA VKSARRYKSL LEGAGNAIFI FSADTGLLEE ENRVGRELLG FNKEELDSIQ 
ARDLLHPDEH ERFRSFLYQV KRNGRGELDS VRIRKKNGTF FLAEINARLI DLGDEQVAHC 
LMRDITKKRR TEKEIWQRNR ELSILNDILT GMNHSADLEQ EQHRTLLEIM ELFEAGGGTM 
HLYRGDQKSA RLCASCCVSA ELEQRISQSL AHDPERFLKV KRLKAPQVKE LGAAAEGWQC 
FTAVPISAQE HLVGVMHLMH REPCRHSAEE LRFLESVGKQ MGNIIEKGRL FAELNWKSGE 
LLRSHRLLEK SSHNLSVSEI RLKQNLALVE QANLEQNRLD RMKNQFLGMV SHEFNTPLTS 
IISGVEHLLQ NGWHSEQEAR SVLELVRDGG LRLKGLVADL LKLIKVEARR GALETSAVHL 
RHFLSELSAQ LQPQLEERGQ RVTLAGLDEL PYFDADRHYL ERVFGELLQN AIRFSPHRGE 
IVVTGKVVDR PALLERRETL ERFNPEFLRR CGDRCYLEVE VRDSGIGIPP EEQQGIFGIF 
YEVGEIKHHS SGMSREQGRG AGLGLAMVKG MVEAHGGMVW VESAGGSSFF LVLPLEQEAI 
QPALF