Gene GM21_3728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3728 
Symbol 
ID8139102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4295805 
End bp4296716 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content65% 
IMG OID644871347 
Productperiplasmic solute binding protein 
Protein accessionYP_003023505 
Protein GI253702316 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones101 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCGTC TTCTCAGCCC TGTACTCTTC ATCCTCTCGC TTATCCCTAT GGCTGCCTTC 
GGCGCGGAGA AGCCGATCGT GGTCGCCTCG ACCACCCAGA TCGCCGACTT CGCGCGCCAG
GTCGCGGGCG ACCGCCTGAC GGTCCGCAGC ATCCTCGCGC CGGGCGCCGA CCCGCACACC
TACCAGCCGA CGCCGGACGA CGTGCAGGTG GTGCTGAGCG CGAGCCTCTG TCTGGAGAAC
GGCCTGCACC TGGAGGGGAA GAACTGGATG GGGGCGCTGG CCCGCGACGC GAGAAAGAAG
CTGGTCACCG TCTCGCAGGG GGTGGCCCCG CTGCAGTTGG GGAAGGGGGG GGAGGTCGTA
CCCGACCCGC ACGCCTGGTT CTCCGTGCAA AACGCGGCAA TCTACGTCAA TAACATCATC
GAGGCGATGG GGCGGCTCGA CCCGGCGCAT GCCGGCGAGT TCCGCGCCCG TGGCACGCTC
TACCTGCAGC AGTTGAGGGT CCTGGACGCC TGGATCAAGG AAGAGGTAGG GCGCATTCCC
CCCTCCCGCC GCATCCTCGT CACCACCCAT GACGCCTTCA ACTATTTCTG CCGCGATTAC
CGTTTCAACC CCAACAACCG TTATCAGAGC ATAGCGCCGG TCGGGTGGTC CACCGGGGCC
GAGGTGGGGG GAGGGATGAC CCCCAAGCGG CACCAGCAGG TGGTTGACTC CATCCGCCGG
TCCGGCGCCC GCGCCATCTT CGTCGAAACC ACCATCAATC CCAAGCAGAT CCGCGAGATC
GCCCAGGAGA CCGGGGTCGC CATCGGCGGC GAGCTTTATT CCGATTCCAT GGGAACGGCG
GGATCCGCTG GGGAGAGCTA TTTGGGCATG ATGCGTGAGA ACGTTCTTTT GATGGTCCAG
GCGCTCAGGT AG
 
Protein sequence
MLRLLSPVLF ILSLIPMAAF GAEKPIVVAS TTQIADFARQ VAGDRLTVRS ILAPGADPHT 
YQPTPDDVQV VLSASLCLEN GLHLEGKNWM GALARDARKK LVTVSQGVAP LQLGKGGEVV
PDPHAWFSVQ NAAIYVNNII EAMGRLDPAH AGEFRARGTL YLQQLRVLDA WIKEEVGRIP
PSRRILVTTH DAFNYFCRDY RFNPNNRYQS IAPVGWSTGA EVGGGMTPKR HQQVVDSIRR
SGARAIFVET TINPKQIREI AQETGVAIGG ELYSDSMGTA GSAGESYLGM MRENVLLMVQ
ALR