| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3477 |
|---|
| Symbol | |
|---|
| ID | 8138849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4022373 |
|---|
| End bp | 4023341 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644871097 |
|---|
| Product | Trans-hexaprenyltranstransferase |
|---|
| Protein accession | YP_003023257 |
|---|
| Protein GI | 253702068 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.00654823 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCAG CGCTTGCCCT TATCGGGGAA GACCTGAAAA ATGTGGAACT GCAGTTCAAG
AAGGATCTGC AGTCGGATGT CCCACTGATT CGCAAGGTGG GTGAGTATGT GCTCTCCAGC
GGCGGCAAGC GTATCCGTCC CGCCCTGGTG CTCCTGGCTT CCAGGCTTTG CGGCTATGAC
GGCAACCGCA GCGTTCCGCT GGCAAGTGTA GTGGAGTTCA TCCACACGGC GACCCTTTTG
CACGATGACG TCGTCGACAA CGCGAACCTG CGCCGGGGGC TCGCCTCTGC CAATACGCTT
TGGGGGAACG AGGCGTCGGT CCTGGTAGGC GATTTCCTCT TCTCGAAGTC GTTTTCCCTC
ATGGTTACCG ACGGCGATCT GCGCATACTG AAGGTGCTGG CGGACGCCAC CACCATAATA
GCCGAGGGTG AAGTCCTGCA ACTGGTCTGC ACCTGCGACC TAGACATAAC CGTTGAGCGC
TACATCGAGG TGGTCCGGAG CAAGACGGCG ATCCTGCTCT CCGCCGCCTG CGAGGTGGGG
GCCATCCTGG GAGAGGCCGA CCCCGAGCAC AGGCAGGCCC TGGCGGATTA CGGCATGGAC
CTCGGCATCG CCTTCCAATT GATGGACGAC ACCCTGGATT ACACCGCCAG CGAGGAGCAG
TTCGGCAAGA GCATCGGCCA CGACCTGGAG GAAGGGAAGA TCACTCTTCC CCTGATCCAC
ACGCTCAGGA ACTGCACCGA GCAGGAGCGC GACCTGATCG CCTCGGTGGT GGAAAAGGAA
CTCCTCTCCG ATGAGGATTT CGCCCAAGTG CTGGAGCTGG TGCAGCGCTA CGGCGGCATC
GAGCACACCG TTGCCTCCGC GGCGGAGCAC GTGGTCCTTT GCAAGCGGCA CTTGGAGAAA
TTCCCCCCTT CCGCCACCCG GGAGGCGCTC GCCGAACTCG CCGAGTATGT AGTGACCCGC
GTCAAATAA
|
|---|
| Protein sequence | MDAALALIGE DLKNVELQFK KDLQSDVPLI RKVGEYVLSS GGKRIRPALV LLASRLCGYD
GNRSVPLASV VEFIHTATLL HDDVVDNANL RRGLASANTL WGNEASVLVG DFLFSKSFSL
MVTDGDLRIL KVLADATTII AEGEVLQLVC TCDLDITVER YIEVVRSKTA ILLSAACEVG
AILGEADPEH RQALADYGMD LGIAFQLMDD TLDYTASEEQ FGKSIGHDLE EGKITLPLIH
TLRNCTEQER DLIASVVEKE LLSDEDFAQV LELVQRYGGI EHTVASAAEH VVLCKRHLEK
FPPSATREAL AELAEYVVTR VK
|
|---|
| |