| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3415 |
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| Symbol | |
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| ID | 8138782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3947520 |
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| End bp | 3949262 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644871032 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_003023197 |
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| Protein GI | 253702008 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 135 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG TAGATGAGAA AAGAAAAACC ACCTTCAAGA GGCTGCTGCA ATACAGCCGC
CCCTACTGGT GGCGTATCGC CTTGGCGGCC CTGGGCTCCC TGGGTGTCGG CGCCATGGAC
GGAGCCCTCG CCTACATGGT GGAGCCGGTC TTGAGAAAGA TCTTCTCCGG GAAGGAGACC
GGCATATTCA TGCTCCTTCC CATAGGGATA ATCGTGCTCT ACGCGCTGCG CGGCTGCTGC
CGCTACACCA ACGACTTCTT CATCAGGAGC GCGGGGCAGC TTGCCGTGCA GGACGTCAGA
AACGACCTGT ACCAGAAGAA CATGAGGCTC AGCCTCGGGT ACTTCTTCCG CAACGAGACC
GGGACCCTCA TGTCGCGCGT CTTAAGCGAC GTCGCCATGA TGCAGGAAGG GGTGGCGAGC
GTCATCACCG GCCTGTTCCG CGACGGCATC TCGTCGGTCT CGCTTTTGTG CGTCATCTTC
TACCGCGACT GGAAGCTTGC GCTGATATCC TTCGTCGTCA TCCCGCTCAC CGTGCTCCCG
GCACAGAAGA TCGGCAAGAG GATCAAAGGG CTGGCCCGTC ACGGCCAGGA GAAAATGGGG
GACCTGGCCA GCATCCTCCA GGAGACCTAT TCCGGCATCA AGGTGGTGAA GGCGTTCGGG
CTGGAGGAGC GCGAGGTGGA GCGCTTCAAG CGCAGCAACG AGGAGTTCTA CTACTTCACC
AGGAAGAACA TCAAGTACGA GGGGCTCTCC GCCCCCATCA TGGAGTTCAT CATCTCCTTC
GGCGTGGCGG CAGTCATCTG GGTCGGCGGC AGCAGCGTCA TGCAGGGAAC CCGCAGCGCC
TCGGAGTTCT TCTCCTTCAT CACCGCCATG GTGCTTGTGT TCACCCCCAT CAAGCGGCTG
ATCGCCTCCT ACAACAACCT CCAGCGCTCG GTCGGCGCAG CGGAGAGGGT GTTCGAGGTG
ATGGACGAGG AGCCGGAGAT CGTCGATCTT CCCGGTTCCG GCGACCTGGG GAGGGCCAAG
GGGGAAGTGG AATTCCGCGA CGTTCACTTC AAGTACGACG ACGAGTACGT ACTGCAGGGG
GTGAACCTCA CGGCCAGAAG GGGTGAGGTG ATCGCCCTGG TCGGACCTTC CGGCGGCGGC
AAGACCACGC TGGTCTCGCT GATCACCAGG TTCTACGATC CGAGCAAGGG CGCTGTTCTC
ATGGACGGGG TGGATATCCG GCAGCGCACC GTGAAGAGCC TCCTGGAACA GATCGCGCTG
GTGGACCAGG AGACCATCCT CTTCAACGAC ACCATCGCCA ACAACATCCG CTACGGCAAG
ATCGACGCCA CCGACGCCGA GGTCGAGGCC GCGGCGCGCG CCGCCTTCGC GCACGACTTC
ATCCTGGAAC TCCCGGAAGG GTACGAGACC AACATCGGCG ACCGCGGCGT CCGCCTCTCC
GGAGGGCAGA GGCAGAGGCT CTGCATCGCC CGGGCCATTC TCAAGGACGC GCCGATTCTG
ATCCTGGACG AGGCCACGAG CGCCCTCGAC ACCGAGAGCG AGCAGATGGT GCAGCAGGCC
CTGAACAACC TGATGCACAA CCGCACCACC TTCGTCATCG CGCATAGGCT TTCCACCATC
ACCCACGCCG ACCGCATCGT CGTCTTGGAG AAGGGGGCGG TCGCCGAGAT GGGGAACCAC
CAGGCACTGA TGGACAACGA CGGCCTCTAC AGCCGCCTGC ACGGGATGCA GTTCAAGGTG
TAG
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| Protein sequence | MSAVDEKRKT TFKRLLQYSR PYWWRIALAA LGSLGVGAMD GALAYMVEPV LRKIFSGKET
GIFMLLPIGI IVLYALRGCC RYTNDFFIRS AGQLAVQDVR NDLYQKNMRL SLGYFFRNET
GTLMSRVLSD VAMMQEGVAS VITGLFRDGI SSVSLLCVIF YRDWKLALIS FVVIPLTVLP
AQKIGKRIKG LARHGQEKMG DLASILQETY SGIKVVKAFG LEEREVERFK RSNEEFYYFT
RKNIKYEGLS APIMEFIISF GVAAVIWVGG SSVMQGTRSA SEFFSFITAM VLVFTPIKRL
IASYNNLQRS VGAAERVFEV MDEEPEIVDL PGSGDLGRAK GEVEFRDVHF KYDDEYVLQG
VNLTARRGEV IALVGPSGGG KTTLVSLITR FYDPSKGAVL MDGVDIRQRT VKSLLEQIAL
VDQETILFND TIANNIRYGK IDATDAEVEA AARAAFAHDF ILELPEGYET NIGDRGVRLS
GGQRQRLCIA RAILKDAPIL ILDEATSALD TESEQMVQQA LNNLMHNRTT FVIAHRLSTI
THADRIVVLE KGAVAEMGNH QALMDNDGLY SRLHGMQFKV
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