| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3402 |
|---|
| Symbol | |
|---|
| ID | 8138769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3933725 |
|---|
| End bp | 3934498 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644871019 |
|---|
| Product | glucose-1-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_003023184 |
|---|
| Protein GI | 253701995 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 136 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTAG TAATTCTCGC AGGCGGTTTC GGGACCAGGA TCAGCGAGGA GTCGCACTTG
AAGCCTAAGC CGATGATAGA GATCGGCGAA CGCCCCATCC TGTGGCACAT CATGAAGATG
TACTCCCACT ACGGTTTCAA CGACTTCGTG ATCTGCCTGG GTTACAAGGG GTACTGCATC
AAGGAGTACT TCGCCCACTA CTTCCTGCAC GAGTCCGACG TCACCTTCGA CTTCAGGAAC
TCCAACGAGC GCGTGGTCCA TCATCATTCC GCCGAGCCCT GGTCGGTCAC CCTGGTCAAC
ACCGGGCTGG AGACCATGAC CGGCGGCCGC GTGAAGAGGG TTCGGGACTA CCTCGACGGC
GAGACCTTCA TGCTCACCTA TGGCGATGGT GTTTCCGATG TACCCGTCGA CAAGCTCCTC
GCATACCACC GGGGTCACGG GAAGCTGGCT ACGGTGACCT CGACGCAGCC CACCGGCCGC
TTCGGCGCCC TGGACCTCGC CGGCGACAAC CAGGTTCGCG GCTTTCAGGA GAAGCCCAAG
GGGGACGGCT CCTGGATCAA CGCCGGGTTC TTCGTCATGG AGCCCGCGGT GCTCGACCTA
ATCGACGGGG ACTCGACCGT CCTGGAAAAA GCGCCGATGG AGTCGCTGGC CAAAAGCGAG
CAACTGGTGG CCTTCAAGCA CGACGGCTTC TGGCAGCCTA TGGACACGCT GCGCGACAAG
AACTACCTGG AAGATCTCTG GAAGTCGGGG CAGGCCCCGT GGAAACAGTG GTAA
|
|---|
| Protein sequence | MKVVILAGGF GTRISEESHL KPKPMIEIGE RPILWHIMKM YSHYGFNDFV ICLGYKGYCI
KEYFAHYFLH ESDVTFDFRN SNERVVHHHS AEPWSVTLVN TGLETMTGGR VKRVRDYLDG
ETFMLTYGDG VSDVPVDKLL AYHRGHGKLA TVTSTQPTGR FGALDLAGDN QVRGFQEKPK
GDGSWINAGF FVMEPAVLDL IDGDSTVLEK APMESLAKSE QLVAFKHDGF WQPMDTLRDK
NYLEDLWKSG QAPWKQW
|
|---|
| |