Gene GM21_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3378 
SymbolasnC 
ID8138745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3910006 
End bp3911391 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content64% 
IMG OID644870996 
Productasparaginyl-tRNA synthetase 
Protein accessionYP_003023161 
Protein GI253701972 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID[TIGR00457] asparaginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGA GAACCAGGGT AAAACAGGCA CTGAGCGAGG GACGGCCGGG CGAGACTTTA 
CTGCTCAAGG GGTGGGCGAG GACGGTGCGG ACCGGCAAGG GGGTGACCTT CATCTCCCTG
AACGACGGGT CGACGCTGGC GGGGATTCAG GTGGTGGCCG AGCCGGAGCT TGCCAATTAT
GCGGAGGTTG CCGCACTTGG CACCGGGAGC GCGATAACCG TCACCGGCGT GCTGCAGGAG
TCCCCCGCTG CTGGCCAGGA ACTGGAGCTC AAGGCGCTCT CGGTAGAAGT GGTGGGTGCG
GCGGACCAGG AATACCCGAT GCAGAAAAAA AGGCACAGCT TCGAATACCT GCGCACCATC
GCCCACATGA GGGTGCGCAG CAACACCTTC GGCGCCGTGT TCCGCGTCCG GTCGGCGCTG
GCCCAGGAGG TGCACCGTTT CTTCGCCGAG CGCGGCTTTC TCTACGTGCA CACCCCCATC
ATCACCGCCA ACGACTGCGA GGGGGCGGGG GAGCTCTTCC GCGTCACCAC GCTGGACCTG
AACAACCCGC CCAGGGTCGA GGGTGAGATC GACTTCGCGC AGGACTTCTT CGCTAAAGCC
ACCGGCCTTA CCGTGAGCGG GCAGTTGGAG GGGGAACTCT TCGCCCAGGC CTTCTCCGAC
ATCTACACCT TCGGCCCCAC CTTCCGCGCG GAGAACTCCA ACACGGCGCG GCACGCCGCC
GAGTTCTGGA TGATCGAGCC GGAGATGGCC TTCGCCGACC TCTCCGACGA CGCCGATCTC
GCCGAGGCCT TTTTGAAACG GCTCTGCCGC TTCGCGCTGG ATAACTGCGA CGAGGACATG
AGGTTCTTCA ACACGCAGAT CGACAAGGGG CTCATCGAGC GGATAGAGGG GGTGGCGCAG
GCATCCTTCG CCAGGATGGA TTACGGCGAG GCGATCGAGC GGCTCAAGAA GGCGCCGGTC
TCCTTCCAGT TCCCCGTGGA GTGGGGGCTC GACCTGCAGT CCGAGCACGA GCGCTACCTG
ACCGAGCAGG TGGTCGGCGG GCCGGTCTTC ATAATGAATT ACCCCAAGGA GATCAAGGCG
TTCTACATGA GGCTCAACGA CGACGGCAGG ACCGTCGCCG CCATGGACCT ACTGGTCCCC
AAGGTGGGAG AGATCATCGG GGGGAGCCAG CGCGAGGAGC GGTTAGAGCC GCTGATCGGG
CGGATGAAGG AGGTCGGCAT CGATCCGGAG TCGCTTTCCT GGTACCTTGA CACCAGGCGC
TGGGGCTCGA CCCCGCACGC CGGGTTCGGC CTCGGTTTCG AAAGGCTGAT CATGTACCTG
ACCGGGATGG AGAACATCAG GGACGTGATA CCGTTCCCCA GGACGCCGAG GCACGCGGAA
TTTTAG
 
Protein sequence
MTARTRVKQA LSEGRPGETL LLKGWARTVR TGKGVTFISL NDGSTLAGIQ VVAEPELANY 
AEVAALGTGS AITVTGVLQE SPAAGQELEL KALSVEVVGA ADQEYPMQKK RHSFEYLRTI
AHMRVRSNTF GAVFRVRSAL AQEVHRFFAE RGFLYVHTPI ITANDCEGAG ELFRVTTLDL
NNPPRVEGEI DFAQDFFAKA TGLTVSGQLE GELFAQAFSD IYTFGPTFRA ENSNTARHAA
EFWMIEPEMA FADLSDDADL AEAFLKRLCR FALDNCDEDM RFFNTQIDKG LIERIEGVAQ
ASFARMDYGE AIERLKKAPV SFQFPVEWGL DLQSEHERYL TEQVVGGPVF IMNYPKEIKA
FYMRLNDDGR TVAAMDLLVP KVGEIIGGSQ REERLEPLIG RMKEVGIDPE SLSWYLDTRR
WGSTPHAGFG LGFERLIMYL TGMENIRDVI PFPRTPRHAE F