| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3360 |
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| Symbol | lpxC |
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| ID | 8138727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 3888790 |
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| End bp | 3889707 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644870978 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_003023143 |
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| Protein GI | 253701954 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 0.623747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATATTCC AACAGACATT GGGGAACAAA GCAACATTCA GCGGCATCGG ACTGCACACG
GGTAAGACCA TTACCCTGAC GCTGCGCCCG GCCGAGGCCG GGACCGGCAT CGTCTTTCAC
AGGGTTGACC TCTCCCCCGC CGTCTCCATC GAGGCGCACG CCTCCAACGT CGTCAACACC
AGGCTCTCCA CCACCATCGG CCGCGGCGAC GCGAGCGTTT CGACCATAGA ACACCTGATG
GCAGCCCTCT ACGGCTGCGG CATCGACAAC GCCCACGTCG ACATCGACGG CCCCGAAGTC
CCGATCATGG ACGGCTCCGC CGCCCCCTTC GTGGCCGCGA TCGCCAAGGC AGGGGTGAAG
ATGTCCGGCA AGGCGCGCAA ATATCTCGTG GTTAAGAAAC CGGTGACCGT CGTGGATGGG
GACAAAAAAG CGACCATCAT CCCCTCGCGC CACTACAAGA TCTCCTTCGA CATGCAGTTC
GCCCACCCGG CGGTAAAGAG CCAGTTCCGC TCCCTGGAGT TCAGCCAGGA AAGCTTCATC
GGCGACTTCG CCGCGGCAAG AACCTTCGGC TTCCTGGCAG AGGTGGAGAT GATGAAGTCC
CACGGCCTGG CGCTGGGCGG GTCGCTGGAG AACGCCGTGG TAATCGGCGA CAACGGCGTC
ATCAATCCGG AAGGGCTCAG GTTCCAGGAC GAGTTCGTGC GCCACAAGAT CCTCGACTCC
GTAGGCGATC TTTCGCTCGC CGGCCACCGT CTCATCGGCC ACGTGAAGGC GACCAAATCG
GGACACGACC TAAACCACAA GCTGGTCACC GAGCTTTTGA AGCGCCCGGA CTGCTACACG
CTGATCGAGT TCACTCCCCA GGCCTTCAAC GCGCCGTTCA ACATCGGCAT TCCGGAACTC
TCCTGGCTGG AGGCTTAA
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| Protein sequence | MIFQQTLGNK ATFSGIGLHT GKTITLTLRP AEAGTGIVFH RVDLSPAVSI EAHASNVVNT
RLSTTIGRGD ASVSTIEHLM AALYGCGIDN AHVDIDGPEV PIMDGSAAPF VAAIAKAGVK
MSGKARKYLV VKKPVTVVDG DKKATIIPSR HYKISFDMQF AHPAVKSQFR SLEFSQESFI
GDFAAARTFG FLAEVEMMKS HGLALGGSLE NAVVIGDNGV INPEGLRFQD EFVRHKILDS
VGDLSLAGHR LIGHVKATKS GHDLNHKLVT ELLKRPDCYT LIEFTPQAFN APFNIGIPEL
SWLEA
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