Gene GM21_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3340 
Symbol 
ID8138702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3867376 
End bp3867903 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content57% 
IMG OID644870953 
ProductNusG antitermination factor 
Protein accessionYP_003023123 
Protein GI253701934 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0014891 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACATA AATGGTACGG CGTACATACC TACTCCGGAT TCGAGAACAA GGTGCGCCTC 
TCGCTTGCCG AGCGCATCAA GAACCTCGAG ATGGAGGAGT TCTTCGGCGA GATCCTGATC
CCGTGCGAAA CCGTCGTCGA ACTGAAAAAA GGGGAGAAGA AGACTTCGTC CAGGAAGTTC
TTCCCCGGCT ACATCCTGGT CAACATGGAA TTGAACGACG ACACCTGGCA CGTGGTCAAA
GAGACCGCTA AAGTGACCGG GTTCGTCGGA GGCAACAACC CTTTCCCGAT CCCGGACGAC
GAAGTCGCCA AGATCACGAA GAGGATGGAG GAGGGCGCTG AGAAGCCCCG TCCCAAGGTT
CTCTTCGAGG TGGGCGAGAC GGTGCGGGTC ATCGACGGTC CATTCCTCAA CTTCTCCGGC
GTGGTCGAGG ACGTTAAACC CGACAAGGGG AAACTCAAGG TCATGGTCAG CATCTTCGGG
CGCGCCACCC CGGTCGAGCT CGAGTTCATG CAGGTAGAAA AGCAGTAG
 
Protein sequence
MAHKWYGVHT YSGFENKVRL SLAERIKNLE MEEFFGEILI PCETVVELKK GEKKTSSRKF 
FPGYILVNME LNDDTWHVVK ETAKVTGFVG GNNPFPIPDD EVAKITKRME EGAEKPRPKV
LFEVGETVRV IDGPFLNFSG VVEDVKPDKG KLKVMVSIFG RATPVELEFM QVEKQ