Gene GM21_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3330 
Symbol 
ID8138692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3852008 
End bp3853198 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content62% 
IMG OID644870943 
Productelongation factor Tu 
Protein accessionYP_003023113 
Protein GI253701924 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value6.91579e-16 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAG CTAAATTTGA AAGAACCAAG CCGCACGTTA ACATCGGCAC CATCGGCCAC 
GTCGACCACG GCAAGACCAC CCTGACCGCA GCGATCACCA AGGTCCTCGC AGGCAAGGGC
CAGGCCGAGT TCAAGGCGTT CGACCAGATC GACAACGCAC CGGAAGAGCG CGAGCGCGGT
ATCACCATCG CGACCGCACA CGTAGAGTAC GAGACCGACA AGCGTCACTA CGCCCACGTC
GACTGCCCCG GCCACGCCGA CTACGTAAAG AACATGATCA CCGGCGCGGC GCAGATGGAC
GGCGCGATTC TGGTTGTTTC CGCAGCCGAC GGCCCGATGC CGCAGACCCG CGAGCACATC
CTGCTCGCAC GTCAGGTCGG CGTCCCCTAC ATCGTCGTGT TCCTGAACAA GGCCGACATG
GTGGACGACG AGGAACTCCT CGAGCTGGTC GAGCTGGAAG TTCGCGAACT CCTCTCCTCC
TACGACTTCC CGGGCGACGA TATCCCGATC ATCAAGGGTT CCGCTCTTAA AGGCCTCGAA
GGCGACGCCG GCGAGCTGGG CGAGCAGGCC ATCATGAAAC TGATGGAAGC TGTCGACACC
TACATCCCGG AGCCGGTTCG CGCCATCGAC AAGCCGTTCC TGATGCCGGT CGAAGACGTT
TTCTCCATCT CCGGTCGCGG TACCGTCGCA ACCGGTCGTG TCGAGCGCGG CATCGTGAAG
GTCGGCGAGG AGGTCGAGAT CGTCGGCATG AAGGCCACCG CGAAGACCAC CGTCACCGGC
GTCGAGATGT TCCGTAAGCT CCTCGACGAA GGTCGCGCAG GCGATAACAT CGGCGCGCTG
CTGCGCGGCG TGAAGCGGGA AGAGATCGAG CGCGGCCAGG TTCTCTCCAA GCCCGGCTCC
ATCACCCCGC ACACCAAGTT CAAGGCAGAA GCCTACATCC TCTCCAAAGA GGAAGGCGGC
CGTCACACCC CGTTCTTCAA CGGCTACCGT CCGCAGTTCT ACTTCAGGAC CACCGACGTG
ACCGGCGTGG TCGACCTCGA GGCAGGCGTC GAGATGGTTA TGCCGGGCGA CAACGTCTCG
GTGACCGTCA ACCTGATCAC CCCGATCGCC ATGGACGAAG GTCTGCGCTT CGCGATTCGT
GAAGGCGGCC GTACCGTCGG CGCCGGTGTC GTAGCCTCCA TCATCGAATA A
 
Protein sequence
MAKAKFERTK PHVNIGTIGH VDHGKTTLTA AITKVLAGKG QAEFKAFDQI DNAPEERERG 
ITIATAHVEY ETDKRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVGVPY IVVFLNKADM VDDEELLELV ELEVRELLSS YDFPGDDIPI IKGSALKGLE
GDAGELGEQA IMKLMEAVDT YIPEPVRAID KPFLMPVEDV FSISGRGTVA TGRVERGIVK
VGEEVEIVGM KATAKTTVTG VEMFRKLLDE GRAGDNIGAL LRGVKREEIE RGQVLSKPGS
ITPHTKFKAE AYILSKEEGG RHTPFFNGYR PQFYFRTTDV TGVVDLEAGV EMVMPGDNVS
VTVNLITPIA MDEGLRFAIR EGGRTVGAGV VASIIE