Gene GM21_3309 details

Gene Information

• Locus tag: GM21_3309
• Symbol: rplO
• ID: 8138671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3842900
• End bp: 3843340
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644870922
• Product: 50S ribosomal protein L15
• Protein accession: YP_003023092
• Protein GI: 253701903
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 38
• Fosmid unclonability p-value: 0.0000000932499
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCAATTAA ATACCATTAA ACCGGCCATC GGGTCGACCA AGAATAGAAA GCGTATCGGC 
AGGGGCGTAG GCTCCGGTCA CGGCAAGACC GCCACCAAGG GTCACAAAGG CCAGAAGGCG 
CGCTCCGGCG GGTCCGTGAA GCCCGGCTTC GAGGGCGGCC AGATGCCGAT GCACAGAAGG 
CTTCCCAAGC GCGGCTTCAC TCCGCTCTCC AAGAAGGACT ACGCCTTGGT GAACCTCTGC 
CAGCTCGAAG TCTTCGAGGC AGGGAGCGTC ATCGACGCTG AAGCGCTGCT GAAAAGCGGG 
ATCATCTCCG GCGTGCGCGA CGGCATCAAG GTGCTGGCGA CTGGTGACAT CACCCGTGCG 
CTGACCATCA AGGCCCACAA ATTCAGCGCC TCTGCTCGCG AAAAAATAAC TGCGGCAGGT 
GGATCCATCG AGGAGATCTA G 

 

Protein sequence

MQLNTIKPAI GSTKNRKRIG RGVGSGHGKT ATKGHKGQKA RSGGSVKPGF EGGQMPMHRR 
LPKRGFTPLS KKDYALVNLC QLEVFEAGSV IDAEALLKSG IISGVRDGIK VLATGDITRA 
LTIKAHKFSA SAREKITAAG GSIEEI