| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3302 |
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| Symbol | rpsD |
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| ID | 8138664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3838553 |
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| End bp | 3839179 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644870915 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_003023085 |
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| Protein GI | 253701896 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.00160725 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGGCTAGGT ATACAGGGCC CTCATGCAGG CTGTGCAGAC GGGAAGGTTC GGAGCTATTT
CTTAAAGGCG AGCGTTGCTA CACCGACAAA TGTGCCATTA AGAGAAGAAG CTATCCCCCG
GGGCAGCACG GCCAGGGCCG CATAAAGGTA TCAGATTACG GTGTTCAGCT GCGTGAAAAG
CAGAAGGTGC GTCGCATCTA CGGCATCCTC GAGAACCAGT TCCGCGGTTA CTTCGAGACG
GCCGACCGAA TGAAGGGCGT TACGGGCGAG AACCTCCTCT TCATCCTGGA GAGAAGGCTC
GACAACGTCG CTTACCGCCT CGGCTTCGCA ACCTCGCGCG ACGAGGCACG TCAGCTGGTA
CGTCACGGAC ACTTCACCCT GAACGGCAGG AAGGTCAACA TCCCTTCCCT TCAGGTGAAG
GCAGGCGATG TCCTGCAACT TCGCGAGAAG AGCCGCAAAG TTGCCGCCAT CTCCGAATCT
CTCGAAGGCG TAGTACGCAG GGGTATCCCG CAGTGGCTTG AACTGGAGAA GGATGCGTTC
AAAGGTACCG TCAAGGCTAT GCCGGTACGC GAGGACATCA CCATGCCGAT TCAGGAACAG
TTAATTGTCG AGCTCTACTC CAAGTAA
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| Protein sequence | MARYTGPSCR LCRREGSELF LKGERCYTDK CAIKRRSYPP GQHGQGRIKV SDYGVQLREK
QKVRRIYGIL ENQFRGYFET ADRMKGVTGE NLLFILERRL DNVAYRLGFA TSRDEARQLV
RHGHFTLNGR KVNIPSLQVK AGDVLQLREK SRKVAAISES LEGVVRRGIP QWLELEKDAF
KGTVKAMPVR EDITMPIQEQ LIVELYSK
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