| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3276 |
|---|
| Symbol | |
|---|
| ID | 8138633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3806279 |
|---|
| End bp | 3807298 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644870885 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003023060 |
|---|
| Protein GI | 253701871 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 102 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTTT TTTCCGGCAG GATCTCGAAG AAAACGATCC TGCTTTTTTC ATGCTTGTTT
CTCCTCCTGG TCCAGGCCTG CTACGCCACG GACTACGACC AGATCTTCAG TGACGCCAAC
GACGCGATGG GGAGCGGAGA TCTCCCTGCA GCCATCGCCA TCCTGCAGAA GGTCGAACCG
GACAAGGGCG ACGACAGCGG CGCCTTCGTC AGGAGTCGGA TGCAGATAGC GAGGCTCCAG
TTCGCCCTCA AGGATATGAA CGCCGCCAGC GCCAGCGCCA ACGAGGTGCT TGCCCTCTAT
CCGGACAACA GCGAGGCGCT CAACTTCATC GCGTCGGTCG AAAAGGAACA GAAGCCGCGC
TACGTAGTCT TCCTGGAGGA CTGTCTCCGC TTCCTGCCCC AGCTCTTGAA GGGGGCGATG
ATGACCATCA CCCTGGTGGT TTGCATCATC GTGATCTCCC CCTTGGGGGG GCTGCTGATC
GCTTTAGGGC GCATCAGCAC CTTCAAGCCG GTCTCCGGGC TCTGCTGGCT CTTCATCTGG
CTCTTCCGCG GCACGCCGCT TCTGCTGCAG CTCTTCTTCA TCTACTACGG CCTTCCATCC
CTGGGCGTCA CCTTCAAACC CTTCACCGCC GCCATCCTGG GCCTCGGCCT CAACTACTCC
GCTTACCTTG GCGAGATCAT CCGCGGCGGC ATCCAGAGCA TCGAGCACGG GCAGATGGAA
GCCGCCAAGG CCATCGGCAT GAGCTACTGG CAGGCGATGC GCCGGGTGAT CATCCCGCAG
ACCTACAAGC GCCTCATGCC TCCCATCGGC AACGAGTTCA TAGCGCTCAT CAAGGACACC
GCGCTGGTCT CCACCATCGC CATGGTGGAA CTGATGCGCT CCGCCGACCA GATGTTCAAC
GCCTATTTCA ACGTGACGGC GCTGATTCTG GCCGCGTTCA TCTACCTCCT CTTCACCACC
ATATTCACCT TCATATTCGA GAAGATCGAG ATCAGGGCCG GCATCTATGA AAACCGCTAA
|
|---|
| Protein sequence | MRLFSGRISK KTILLFSCLF LLLVQACYAT DYDQIFSDAN DAMGSGDLPA AIAILQKVEP
DKGDDSGAFV RSRMQIARLQ FALKDMNAAS ASANEVLALY PDNSEALNFI ASVEKEQKPR
YVVFLEDCLR FLPQLLKGAM MTITLVVCII VISPLGGLLI ALGRISTFKP VSGLCWLFIW
LFRGTPLLLQ LFFIYYGLPS LGVTFKPFTA AILGLGLNYS AYLGEIIRGG IQSIEHGQME
AAKAIGMSYW QAMRRVIIPQ TYKRLMPPIG NEFIALIKDT ALVSTIAMVE LMRSADQMFN
AYFNVTALIL AAFIYLLFTT IFTFIFEKIE IRAGIYENR
|
|---|
| |