Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3240 |
Symbol | |
ID | 8138592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3759149 |
End bp | 3759850 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644870844 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_003023024 |
Protein GI | 253701835 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAC TGATGGTACT AACCTCGCAT GACAAGCTCG GCAATACCGG TGAGCAGACA GGTTTCTGGC TCGAAGAGTT CGTCGCTCCT TACTATGTCT TTAGGGACGC CGGGGCCAGG TTAACCGTTG CTTCGACAAA AGGAGGTAAG CCTCCGGTGG ATCCTAAGAG TGATCTCCCT GAAAACCAGA CAGAGGGGAC CCGACGCTTT GCCAAGGATC AGGCCGCTCA GGCTGAACTT GCCAACAGTA TCAGTCTTAG CGCCGTTTCC GCCGAAGAGT ACGACGCGGT ATTTTATCCC GGCGGCCACG GTCCCCTGTG GGACCTCGCC GTCAACCCCA CCTCGATCTC CCTGATCGAG AAATTCGCCA GGTCCGGGAA ACCGGTGGCC GCGGTCTGCC ATGCCCCGGC TGTGCTGGCG GATGTAAGGG GAGAGGATGG CGAGTACCTG GTGAAGAACA AACGGGTGAC CGGGTTCACC AATTCCGAGG AGCGGGCGGT CGGATTGATC GAGGTGGTCC CCTTTCTCCT GGAGGACCGG CTGAAGGATC GGGGGGCGTT CTTTGGCAGC GGCGCGGATT GGCAACCTTA CGTGCAGGTC GACGGCAAGT TGATCACGGG GCAGAATCCG GCATCGTCCG CGCCCGCAGC CCAGGCCCTG CTCCAACTGC TGCAGAGCCG AACCGGAGAG CCGTTGCGAT AA
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Protein sequence | MKILMVLTSH DKLGNTGEQT GFWLEEFVAP YYVFRDAGAR LTVASTKGGK PPVDPKSDLP ENQTEGTRRF AKDQAAQAEL ANSISLSAVS AEEYDAVFYP GGHGPLWDLA VNPTSISLIE KFARSGKPVA AVCHAPAVLA DVRGEDGEYL VKNKRVTGFT NSEERAVGLI EVVPFLLEDR LKDRGAFFGS GADWQPYVQV DGKLITGQNP ASSAPAAQAL LQLLQSRTGE PLR
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