Gene GM21_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3240 
Symbol 
ID8138592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3759149 
End bp3759850 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID644870844 
ProductThiJ/PfpI domain protein 
Protein accessionYP_003023024 
Protein GI253701835 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAC TGATGGTACT AACCTCGCAT GACAAGCTCG GCAATACCGG TGAGCAGACA 
GGTTTCTGGC TCGAAGAGTT CGTCGCTCCT TACTATGTCT TTAGGGACGC CGGGGCCAGG
TTAACCGTTG CTTCGACAAA AGGAGGTAAG CCTCCGGTGG ATCCTAAGAG TGATCTCCCT
GAAAACCAGA CAGAGGGGAC CCGACGCTTT GCCAAGGATC AGGCCGCTCA GGCTGAACTT
GCCAACAGTA TCAGTCTTAG CGCCGTTTCC GCCGAAGAGT ACGACGCGGT ATTTTATCCC
GGCGGCCACG GTCCCCTGTG GGACCTCGCC GTCAACCCCA CCTCGATCTC CCTGATCGAG
AAATTCGCCA GGTCCGGGAA ACCGGTGGCC GCGGTCTGCC ATGCCCCGGC TGTGCTGGCG
GATGTAAGGG GAGAGGATGG CGAGTACCTG GTGAAGAACA AACGGGTGAC CGGGTTCACC
AATTCCGAGG AGCGGGCGGT CGGATTGATC GAGGTGGTCC CCTTTCTCCT GGAGGACCGG
CTGAAGGATC GGGGGGCGTT CTTTGGCAGC GGCGCGGATT GGCAACCTTA CGTGCAGGTC
GACGGCAAGT TGATCACGGG GCAGAATCCG GCATCGTCCG CGCCCGCAGC CCAGGCCCTG
CTCCAACTGC TGCAGAGCCG AACCGGAGAG CCGTTGCGAT AA
 
Protein sequence
MKILMVLTSH DKLGNTGEQT GFWLEEFVAP YYVFRDAGAR LTVASTKGGK PPVDPKSDLP 
ENQTEGTRRF AKDQAAQAEL ANSISLSAVS AEEYDAVFYP GGHGPLWDLA VNPTSISLIE
KFARSGKPVA AVCHAPAVLA DVRGEDGEYL VKNKRVTGFT NSEERAVGLI EVVPFLLEDR
LKDRGAFFGS GADWQPYVQV DGKLITGQNP ASSAPAAQAL LQLLQSRTGE PLR