| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3206 |
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| Symbol | |
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| ID | 8138558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 3718594 |
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| End bp | 3719907 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644870811 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003022991 |
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| Protein GI | 253701802 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.235983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTCG ATGGTATCAA GCCTCAGGCG GTGCAGGGTC CGGCGGCGAC GGAATCGGAA
CTCTTCAAGG AGATGAAGAC CCGGATCCAC CGCCGCCTGA TCGACAGCAT CGACCTCGCC
AAGATGGACC TGATGCGCAA CAGCGAGATG GTGAGCCAGA TCCGCGGCGT GATAGAGAAC
CTCATCGTCG GCGAGGGGAT CCCGCTGAAC CAGATGGAGA GGGACCGGCT GGTACTGGAG
ATCCAGCACG AGACCTTCGG CCTCGGGCCG CTCGAGCCCC TTCTGGCCGA CGACGACATC
TCCGACATCC TGGTGAACGA CAGCTCCAAC GTCTACATCG AGAAAGGGGG GAAGCTGCAA
AAGACCGAGG TCTGTTTCCG GGACAACGCG CACCTGATGC AGATCATCGA GCGCATCGTC
TCCAAGATCG GGAGAAGGAT CGACGAGTCC TCCCCCTACG TCGACGCGAG GCTCCCCGAC
GGCTCCCGCG TGAACGCCAT CATCCCTCCC CTGGCGCTGA ACGGCCCCGT GCTCTCCATC
AGGCGCTTCG GCCTGGAGCC GCTGGTCATG AGGGACCTGC TCAAGCTGCA GGCCCTGGAT
CAGAGGATGG CGGAGCTTTT GGAGGCGGCG GTGCAGACCA GGCTCAACAT CCTGATCTCC
GGGGGGACCG GCACCGGCAA GACCACCCTC TTGAACGTCC TCTCCGCCTT CATCCCGGGG
GGGGAGCGGC TCATCACCAT CGAGGATTCG GCCGAGCTGC ACCTGAAGCA GGAGCACGTG
GTGCGGCTGG AGACCAGGCC CCCCAACCTG GAGGGGCGCG GCGAGGTGAC CTCGCGGGAC
CTGCTGAAAA ACGCCCTGAG GATGCGGCCG GACCGGATCA TCATCGGCGA GGTGCGCGGC
GGCGAGGCGC TCGACCTGCT GCAGGCGATG AATACCGGCC ACGACGGCTC GCTCTCCACG
GTCCACGCCA ACACCACCCG CGACGCCCTC TCCCGCCTGG AGACCATGGT GCTGATGGCC
GGGCTGGACC TCCCGGAGAG GGCCATCAAG GAGCAGATGG CCTCGGCCCT CGACCTGGTG
GTGCAACTGG TCCGCTTCTC GGACGGGACC CGGAAGGTCG TGAAACTCTC CGAGGTGACC
GGGATGGAGG GAAACACCAT CGTCATGCAC GACGTCATCG TGTTCCAGCA AAAGGGGATC
GACCGGCAAG GGAACGTGAT CGGCGAATTC CGCGCCACTG GGGTGAGGCC GCGTTTCGCC
GAGCGCTTCA AGCTCTTCGG ATTCGAGCTA CCCGCCATTA TGTTCGAGAA CTAG
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| Protein sequence | MLLDGIKPQA VQGPAATESE LFKEMKTRIH RRLIDSIDLA KMDLMRNSEM VSQIRGVIEN
LIVGEGIPLN QMERDRLVLE IQHETFGLGP LEPLLADDDI SDILVNDSSN VYIEKGGKLQ
KTEVCFRDNA HLMQIIERIV SKIGRRIDES SPYVDARLPD GSRVNAIIPP LALNGPVLSI
RRFGLEPLVM RDLLKLQALD QRMAELLEAA VQTRLNILIS GGTGTGKTTL LNVLSAFIPG
GERLITIEDS AELHLKQEHV VRLETRPPNL EGRGEVTSRD LLKNALRMRP DRIIIGEVRG
GEALDLLQAM NTGHDGSLST VHANTTRDAL SRLETMVLMA GLDLPERAIK EQMASALDLV
VQLVRFSDGT RKVVKLSEVT GMEGNTIVMH DVIVFQQKGI DRQGNVIGEF RATGVRPRFA
ERFKLFGFEL PAIMFEN
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