Gene GM21_3105 details

Gene Information

• Locus tag: GM21_3105
• ID: 8138455
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 3598483
• End bp: 3599154
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644870709
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_003022891
• Protein GI: 253701702
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 149
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGGAAAA AACGGGTACT GATCGTGGAC GACCACCCGC TTTTCAGGGA AGGGGTGAAG 
AGCCTGGTGG AGAGAAGCGC CAACTACCAG GCCGTGGGAG AGGCGGGGTG CGGCGCCGAG 
GCGCTCGCTC TCGCCCAGGA GCTGAAACCG GACCTGGTCA CCATGGACGT CTCCCTGCCG 
GACATGAGCG GCATCGAGGT GGTGCGGGGG ATACTCGATC TGGCCCCGGA GACCAGGATC 
CTCATGCTGA GCATGTACCC GAAGTTCGAT TACGTGGCGG AGGCATTCAA GGCGGGAGCC 
AAGGGTTACG TGGTGAAGGA GACCACCACC GCCCGGCTGA TCCAGGGGTT CGACGCCTTG 
TGCCGGGGGG AGTTCTTCGT CGACGGGCAG GTCTCACAGG ACCTGGTCGC CAAGCTCGCC 
CAGGGGGCGG CCAGGGACCA GGCCCTGCAG GACGAGAAGT ACGGGCTCCT CACCCCCCGC 
GAGCAGCAGG TGCTGAGGCT CGTGGCGGAA GGGAGCTCGA CCCGCCAGAT AGCCGCCGCC 
ATCGAGTTGA GCCCGAAGAC GGTGGAGAAC CACCGCACCA ACCTGATGAA GAAGCTCGAC 
GTGCACAGCA AGATGGAACT GGTGAAGTAC GCAGCCCGGC TCGGGCTCAT CGACGTGGAG 
AGCTGGCGCT GA 

 

Protein sequence

MGKKRVLIVD DHPLFREGVK SLVERSANYQ AVGEAGCGAE ALALAQELKP DLVTMDVSLP 
DMSGIEVVRG ILDLAPETRI LMLSMYPKFD YVAEAFKAGA KGYVVKETTT ARLIQGFDAL 
CRGEFFVDGQ VSQDLVAKLA QGAARDQALQ DEKYGLLTPR EQQVLRLVAE GSSTRQIAAA 
IELSPKTVEN HRTNLMKKLD VHSKMELVKY AARLGLIDVE SWR