Gene GM21_3069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3069 
Symbol 
ID8138419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3558629 
End bp3559234 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content66% 
IMG OID644870673 
Productnucleoside-triphosphatase 
Protein accessionYP_003022855 
Protein GI253701666 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.0000121074 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGAGC TCCTGGTGGC GTCGGGGAAC AAGGGGAAGC TGCGCGAATT CGAGAAGCTT 
CTGGAGGGGG TGGTGGAGAC CATCCTCTCT CCCGCCGACT TCCCGGGACT TCCGGAGGTG
GAGGAGGACG GCGACAGCTT CGAGGCGAAC GCCCTCAAAA AGGCCCGCTC CGCCGCGCTC
TTTACCGGCA AGCCGGTGTT GGCCGACGAC TCAGGGCTCT GCGTCGACTG CCTTGGGGGG
CGCCCCGGCG TCTACTCGGC GCGCTTTGCC GGAGAGGGGG CGGGGGATGC CGCCAACAAC
GCGCTCCTGT TGCAGGAAAT GGCCGGAGCG CCGCGCGAAG AGCGCACCGG CGCCTTCCAC
TGCGTCATCG CCCTTTGCCT CCACGACGGA AGCTGCCAGA CCTTCGACGG CATGCTAAAG
GGGGAGATAC TGGAGGCGCC GCGCGGGGAG GGGGGATTCG GCTACGACCC GCTCTTCCTG
GTTCCCGAGT ACGGGCAGAC CTTCTCCGAA CTTCCCATGG AGATCAAGAA CGCCATCAGT
CACCGCGGCC GCGCGATGCA GATGCTCAAA GAGGCGCTGC AAAAGAGGGA AGGCGTCTCA
CGCTAA
 
Protein sequence
MKELLVASGN KGKLREFEKL LEGVVETILS PADFPGLPEV EEDGDSFEAN ALKKARSAAL 
FTGKPVLADD SGLCVDCLGG RPGVYSARFA GEGAGDAANN ALLLQEMAGA PREERTGAFH
CVIALCLHDG SCQTFDGMLK GEILEAPRGE GGFGYDPLFL VPEYGQTFSE LPMEIKNAIS
HRGRAMQMLK EALQKREGVS R