Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3069 |
Symbol | |
ID | 8138419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3558629 |
End bp | 3559234 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644870673 |
Product | nucleoside-triphosphatase |
Protein accession | YP_003022855 |
Protein GI | 253701666 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.0000121074 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGAGC TCCTGGTGGC GTCGGGGAAC AAGGGGAAGC TGCGCGAATT CGAGAAGCTT CTGGAGGGGG TGGTGGAGAC CATCCTCTCT CCCGCCGACT TCCCGGGACT TCCGGAGGTG GAGGAGGACG GCGACAGCTT CGAGGCGAAC GCCCTCAAAA AGGCCCGCTC CGCCGCGCTC TTTACCGGCA AGCCGGTGTT GGCCGACGAC TCAGGGCTCT GCGTCGACTG CCTTGGGGGG CGCCCCGGCG TCTACTCGGC GCGCTTTGCC GGAGAGGGGG CGGGGGATGC CGCCAACAAC GCGCTCCTGT TGCAGGAAAT GGCCGGAGCG CCGCGCGAAG AGCGCACCGG CGCCTTCCAC TGCGTCATCG CCCTTTGCCT CCACGACGGA AGCTGCCAGA CCTTCGACGG CATGCTAAAG GGGGAGATAC TGGAGGCGCC GCGCGGGGAG GGGGGATTCG GCTACGACCC GCTCTTCCTG GTTCCCGAGT ACGGGCAGAC CTTCTCCGAA CTTCCCATGG AGATCAAGAA CGCCATCAGT CACCGCGGCC GCGCGATGCA GATGCTCAAA GAGGCGCTGC AAAAGAGGGA AGGCGTCTCA CGCTAA
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Protein sequence | MKELLVASGN KGKLREFEKL LEGVVETILS PADFPGLPEV EEDGDSFEAN ALKKARSAAL FTGKPVLADD SGLCVDCLGG RPGVYSARFA GEGAGDAANN ALLLQEMAGA PREERTGAFH CVIALCLHDG SCQTFDGMLK GEILEAPRGE GGFGYDPLFL VPEYGQTFSE LPMEIKNAIS HRGRAMQMLK EALQKREGVS R
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