Gene GM21_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2916 
Symbol 
ID8138259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3395533 
End bp3396705 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content65% 
IMG OID644870514 
Productcytochrome B561 
Protein accessionYP_003022703 
Protein GI253701514 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID[TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value0.494489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCT TCGACATTCC CGAAGAGGAG ATCCGCATAG AGCTTGGGGA CCCGGCCCCG 
TTCGGCGGAG GGAAACGGCG CGAGCTGATG CTGGCGGCCG CGCTCGGCGC CCCGGTCGGC
ACCCGGGACC CGGTCGATCT GGCCCTGTTG AGCGCTGCCT CGCGCCGCGA GGACCTGCGG
CACTTCGAGC AGACGGCATT CACGCCGCTG GAGCCGCAAC TGGCGCGGAG CATCGCGCGG
GTGCGCCGGG TGGGAACGGA AGAGCAAGAG CTGATTGCCC GCGGCGAGGT CGACGCCATC
CTGTATCTCT GCCGCGCCGA CGAGGCGACC CGCTTCCGGG CGGAGCTGCA GGCGGAGATG
GGGCTGACCC ACGGCTACCG CGCGCTCGGC ATCGCCAAGG CGAAGCCCGA GGCCGGGGGG
GAGGAAAGCT GGACCTTCAT GGGGTACATA CCGGTCCGCG CCACGCGGCA TAAGAGCAGC
CGCAGCGAAG AGCCCGCCGA CTTCAACTAC GTGACCGTCT GGGACTGGCA GCTGCGCGTA
CTGCACTGGC TTTCGGTCTT CCTGATCCTG GTGCTGTCGC TCACCGGCCT TTTGATGGGG
AGCAGCCGTT TCATCTACGG CGTCACGCAA GGGTATTCCA ACTACCTGAG CTGGCTGAGG
CTCACCCATT TCGTCGCAGG GTGGTTCCTT CTTTGCGCCG CCATCCTGCG CATAGCCGGG
CTCTTTCTCG CCTCCAACCG CTTCCAGCGC TGGTACGCCC TTTTCCCGGT GAAAAAGCGC
GACCTGAGCA ACCTGGTCCA GGTGGCGCAG AACTACCTCT TTTGCCGTTT CGAGCGCCCC
CCCCACTACA TAGGCCACAA CCCTCTGCAG CAGATCGCCT ACACCGCCAT CTTCGGCGTC
GGCCTCGCCG CCCTTTTCAC CGGGTTCGCG CTCTACGCGC TCTACGCACC GGACCATTGG
CTTTTGCGCT ACTTCGTCTG GTTCGACAAC CTGATCGGCG TGCAGTACCT GCGCCTTGCC
CACCAGCTGA TCATGTGGAT TTTCCTCGCC TTCATCCCGC TCCACGTCTA CCTCTCCATC
CGCGCCGATA CCGTGGAGCG CGAGGGAGCT CTCTCCTCCA TCGTCAGCGG CGGCCGCTGG
TGCCGGAAAG GAACAAAATT CGAGGACGGT TAG
 
Protein sequence
MKIFDIPEEE IRIELGDPAP FGGGKRRELM LAAALGAPVG TRDPVDLALL SAASRREDLR 
HFEQTAFTPL EPQLARSIAR VRRVGTEEQE LIARGEVDAI LYLCRADEAT RFRAELQAEM
GLTHGYRALG IAKAKPEAGG EESWTFMGYI PVRATRHKSS RSEEPADFNY VTVWDWQLRV
LHWLSVFLIL VLSLTGLLMG SSRFIYGVTQ GYSNYLSWLR LTHFVAGWFL LCAAILRIAG
LFLASNRFQR WYALFPVKKR DLSNLVQVAQ NYLFCRFERP PHYIGHNPLQ QIAYTAIFGV
GLAALFTGFA LYALYAPDHW LLRYFVWFDN LIGVQYLRLA HQLIMWIFLA FIPLHVYLSI
RADTVEREGA LSSIVSGGRW CRKGTKFEDG