Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2898 |
Symbol | |
ID | 8138241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 3364833 |
End bp | 3367382 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644870498 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003022687 |
Protein GI | 253701498 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1.16474e-17 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCACAGA GAACTCCAGA ATCGGAAACC CGCGGTGCCT TCCGAAGCAA ATCGCGCTCG CTTGGCCTAT GGCTGAGCCC CTTATTGATT CTGGGCGCCT TGCTGCTGGT GTTTGCTGTC ATCATCTGGT TCATCGAGGG AAACGACCGG AAGAGCAAGC AGAGCGACCT GAGCGAAAGG GCGAAAACCA TCGGCGGAAC AGTGCAGCTC ACCCTGGAGG GAAACGAGAG CTACCTGGGC ATGCTCGCCC TGGAGCAGGC AGCAGGAAAA CTGGACCGGA CCCTGTTCCA ACAGCGGGCC AGCCGGTACA TCCACGAGCA CCCCGAACTG ATCAACGTCA CTTGGGTGGA CGCCGGCATG TTCGTCCGCG ACGTAGCCCC TTTGACCCGG AACCGCCAGA TACTCGGGCT GCATGTGAAC CTCCCGGAGC CAAAACGCGC CTCCCGCCTT GCAAGGGACC TGCGCCTGCC GGTCTACACC CGCCCGTTCC AGGCCATACA GGGGGTGACC TCCTTCGAAG TATGGGTTCC CGTCTACAGG GACGACACCT TCCTAGGCCT GTTCGCAGGG GTCTACTCCT GCGATAAGCT GCTGCAACAG CTGGTCTCGC AGGTCCGTCC GCGCTCATAC CACCTGGGCC TCGTCGACAG GTACGGTTCG GTGCTGGCGT CCTACCCCGT CCAGGGTCCC TTGGACAAAA ACCTGTCCAA GGAGGTGCTC ATCACCCCCG AGGACAGCGG CGTCATGCTG CGCATCGATA GATACGAGAC CGGCTCCGAG TGGCGCCTCA TGATTTTGAA GTTCCTTTCG CTGGCGCTGG TTCCGGGGCT AGGCTACACC CTGTGGAACT TAAAGCGCGA GATGGACGAG CGCAGGCGGG TCGAGGAGGC GCTCAAAGAG CAGGCGATGA CGCTGGAGCA GGAGATCAGG GAGCGCAAGG CCGCACAGGA GCATCTGCAG GACCAGGCGG TCCTTCTGGA GGAGCAGATC GACGAACGCT GGCAGGCGGA AGAGGCGCTT AGGGGAAGCG AAGAAAGACT GCGCCTCTTG CTTGATTCGG CGGGTGAGGC GATCTACGGC ATAGACCTTC AGGGGAACTG CACCTTCTGC AACAAAGCCT GCCTCAGGAT GCTGGGAGCC CACTCCCCGG ACCAGTACCT GGGACGCAAC ATGCACGACA TCATCCACCA TTCCTACCCG GACGGCACCC CCATGCCCCG AAAGGCGTGC AAGGTGCACC AGACCTTGCG GGAGGAGCAG GGATGCCACG TGAACGACGA GGTTTTCTGG CGCGCGGACG GGAGCAGTTT TCCCGTCGAA TATTGGTCCC ATCCGCAGGT GAAGGATGGG AAGGTGGTCG GCGCGGTCGT CGCCTTCATC GACATCACCG ACCGCAAGCG CCTGGAGGAA CAGTACCGCC AGTCGCAGAA GATGGAATCG GTGGGGCGAC TGGCGGGGGG GGTGGCGCAC GACTTCAACA ACATGCTGAG CGTCATCCTG GGAGCCGCGG AATTGAGCAG ACGTAAGCTG AAGGAAGGCG AACAGATAGA CGCCTACCTG GAGGTGATCA CCAACGCCGC CAAGCGCTCC AGCGAAATCA CCCGGCAGCT CCTCGCCTTC TCGCGCAAGG AGGTGGTCTC ACCCCGTCCG CTGGACCTGA ACCAGCTGAT CCTGGAGTCC AACAAGATCC TGGCCAGGCT GATCAGTGAA GACATAGAAC TCTCTTTCAC TCCAGACCCG GGGCTTTGGA CCGTCTCTAT CGACCCTTCC CAAGTGGACC AGATCCTGAT GAACCTGGCG GTGAACGCCC GCGACGCCAT GCCCAACGGC GGCAGACTCA GCATAGAGAC CAGGAACCTC CGCCTGACCG GCGATTGCAG TCAAATCCAC CCAGACGCGC ACTCGGGCGA TTACGTACAG CTGACGGTGA GCGACACCGG GCAGGGGATG GACAAGGCCA CGGTCGAGCA TATCTTCGAG CCTTTTTTCA CCACAAAGGA ACTGGGCAAA GGGACGGGAC TCGGACTTGC GACCGTCTAC GGCATCGTGA CCCAGAACAG GGGCTTCATC AACGTGTACA GCGAACCGGG CCAGGGGACC GTGTTCAGGA TCAACCTGCC GCGGCTGGCG GGCCAGGTCG ATGGGGCTTC CGGCCAGGAG CAGCCGGTGC CGGCGGCGCT GTCGGGAACG GTACTGCTCG TCGAGGACGA GGAGATGCTG CTCTGGCTGG CGACGAAGCT TTTGGAGGAA CTGGGGTTCA GCGTGATCCA GGCGCCGGGC CCGCGGGAGG CAATCGCGAT CTGCGAGGAC CCGGAACTGC ACCTCGACCT CATCCTGACC GACGTGGTGA TGCCGGAGAT GAACGGCAGC GAGATGGTGG ACAGAATCAA GCAGACCCGC CCCGATCAGA AGGTGCTCTT CATGTCCGGG TACACCTCTG ACGACGTGGT GCGGCGCGGC ATCCTGGAAC AGGGGATGCA GTACATTCAA AAACCTCTGG ATCTGCGCAA CCTGGGCGAG AAAATCGGAC GCATACTGGC GGGGAGCTGA
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Protein sequence | MPQRTPESET RGAFRSKSRS LGLWLSPLLI LGALLLVFAV IIWFIEGNDR KSKQSDLSER AKTIGGTVQL TLEGNESYLG MLALEQAAGK LDRTLFQQRA SRYIHEHPEL INVTWVDAGM FVRDVAPLTR NRQILGLHVN LPEPKRASRL ARDLRLPVYT RPFQAIQGVT SFEVWVPVYR DDTFLGLFAG VYSCDKLLQQ LVSQVRPRSY HLGLVDRYGS VLASYPVQGP LDKNLSKEVL ITPEDSGVML RIDRYETGSE WRLMILKFLS LALVPGLGYT LWNLKREMDE RRRVEEALKE QAMTLEQEIR ERKAAQEHLQ DQAVLLEEQI DERWQAEEAL RGSEERLRLL LDSAGEAIYG IDLQGNCTFC NKACLRMLGA HSPDQYLGRN MHDIIHHSYP DGTPMPRKAC KVHQTLREEQ GCHVNDEVFW RADGSSFPVE YWSHPQVKDG KVVGAVVAFI DITDRKRLEE QYRQSQKMES VGRLAGGVAH DFNNMLSVIL GAAELSRRKL KEGEQIDAYL EVITNAAKRS SEITRQLLAF SRKEVVSPRP LDLNQLILES NKILARLISE DIELSFTPDP GLWTVSIDPS QVDQILMNLA VNARDAMPNG GRLSIETRNL RLTGDCSQIH PDAHSGDYVQ LTVSDTGQGM DKATVEHIFE PFFTTKELGK GTGLGLATVY GIVTQNRGFI NVYSEPGQGT VFRINLPRLA GQVDGASGQE QPVPAALSGT VLLVEDEEML LWLATKLLEE LGFSVIQAPG PREAIAICED PELHLDLILT DVVMPEMNGS EMVDRIKQTR PDQKVLFMSG YTSDDVVRRG ILEQGMQYIQ KPLDLRNLGE KIGRILAGS
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