Gene GM21_2804 details

Gene Information

• Locus tag: GM21_2804
• ID: 8138147
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3260293
• End bp: 3262203
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644870406
• Product: NADH dehydrogenase (quinone)
• Protein accession: YP_003022595
• Protein GI: 253701406
• COG category: [C] Energy production and conversion
• COG ID: [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 67
• Fosmid unclonability p-value: 0.260588
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCAAGGA TAAATTCGCC AGCGGAATTG GAAGCATTCA GGAAAGGCAT CCTGGCCAAA 
CGGGATGACA AGAAGCCCTG CATCACGCTC TGCTCCGGCA GCGCCTGTCA TGCCACGGGG 
AGCGAGAAGG TCGCCGACGC CATCCTGGCC GAGCTGGAAA GCCACGGCCT CAAGGATCAG 
GTCGATATCA GGAGGACCGG CTGCCACGGC TTCTGCGAGC AGGGTCCCAT CGTCGTGGTC 
TACCCGGAAG GGATCAGCTA CCTGAAGGTC AAGCCGGAGG ACGTCTGCGA GATCGTCTCC 
CATACCTTCA AGGAGAAGAA GCTGGTCGAG CGCCTGATCT ACGTCGACCC GAATACCGGG 
GAGAAGTCGA GCCACGAGCA CGACATCCCC TTCTACAAGA ACCAGCAGCG CCTCATCCTG 
GGTCTCAACA CCAAGATCGA CCCCAAGTCC CTTGAGGATT ACCTGGCCGT AGGCGGCTAC 
CAGGCCATGG CCAAGGCGCT TCTCAAGATG ACCCCGGAAC AGGTGATCGG CGAGGTCAAG 
CAGGCGAAGC TTCGGGGGCG CGGCGGCGCC GGCTTCCCCT CCGGGACCAA ATGGGAGTTC 
GCGCGCAACG CGCCGGGGGA CCAGAAGTAC GTCGTGGTCA ACTGCGACGA GGGGGACCCC 
GGGGCCTACA TGGACCGCTC CCTCATGGAA GGTAACCCCT TCACCGTCCT CGAAGGGCTC 
CTGATCGGCG CCTATGCCAT CGGCGCGAGC GAAGGTTACA TCTACGTCCG GCAGGAATAC 
CCGCTCGCCG TCGACAACCT CACCGTCGCC ATCAAAAAGG CGGAGGAACA CGGCTTCCTG 
GGGAAAAACA TCCTCGGCTC CGGATTCGAC TTCACCGTCA AGGTGCACCG CGGCGCCGGC 
GCCTTCATCT GCGGCGAGGA AACCTCGCTT CTCCAGTCGC TGGAAGGAAA GCCCGGCGAG 
CCCAAGCCGA GGCCCCCTTT CCCGGCCATC AAGGGACTTT GGGGCAAGCC GACCAACATC 
AACAACGTCG AGACCTGGGC CAACATCCCG GTGATCATCA ACCAGGGGGC CGAGTACTTC 
AGCTCCATCG GGACCGAGAG CAGCAAGGGG ACCAAGATCT TCTCCCTGGT GGGGAAGGTC 
AACAACACCG GTCTGGTCGA GGTCCCCATG GGGATGCCGC TTCGCGACAT CATCTTCAAG 
ATCGGCGGCG GGGTCCCCAA CGGCAAGAAG TTCAAGGCGG TGCAGACCGG CGGCCCTTCC 
GGCGGCTGCA TTCCCGAGGA ATACCTGGAC GTCAAGGTCG ACTTCGACGA GCTGATGAAG 
ATGGGCGCCA TGATGGGTTC GGGCGGCATG ATCGTCATGG ACGAGGACAC CTGCCTCGTC 
GACATCGCCC GGTACTTCCT GGAGTTCTTG AGCGACGAGT CCTGCGGCAA GTGCGTACCC 
TGCCGCGAGG GTATCCGCCA GATGCTCAAG GTGATGACCG CCATCACCCA GGGGAAGGGT 
AAGGAAGGGG ACATTGAGCT GTTGGAGAAC ATGGCCATGG CGACCCAGGG CGCCGCGCTT 
TGCGCCCTCG GCAAGACCGC TCCCAACCCG GTCCTCTCCA CCCTCAAGTA CTTCCGTCAC 
GAGTACGAGG CCCACATCAA GGAGAAGAGG TGCCCGGCGC TTTCCTGCAA GGAGCTGATC 
GCCTTCCACA TCGACCCGGC CAAGTGCAAA GGGTGCGGCA GCTGTCTCAG GAAGTGTCCC 
GCCACCGCCA TCGAGGGGGG GAAGAAGACC ATCCACGTCA TCGACCAGGA GAAGTGCACC 
AAGTGCGGCA CCTGTATCGA AGCCTGTCCG GCGGCCTTCG GGGCCATAGC GAAGCTCTCC 
GGAGTGCCGG TGCCGGAGCC GCCCGCCCCA TCGGCGCGGG CCTTGGCCTA A 

 

Protein sequence

MPRINSPAEL EAFRKGILAK RDDKKPCITL CSGSACHATG SEKVADAILA ELESHGLKDQ 
VDIRRTGCHG FCEQGPIVVV YPEGISYLKV KPEDVCEIVS HTFKEKKLVE RLIYVDPNTG 
EKSSHEHDIP FYKNQQRLIL GLNTKIDPKS LEDYLAVGGY QAMAKALLKM TPEQVIGEVK 
QAKLRGRGGA GFPSGTKWEF ARNAPGDQKY VVVNCDEGDP GAYMDRSLME GNPFTVLEGL 
LIGAYAIGAS EGYIYVRQEY PLAVDNLTVA IKKAEEHGFL GKNILGSGFD FTVKVHRGAG 
AFICGEETSL LQSLEGKPGE PKPRPPFPAI KGLWGKPTNI NNVETWANIP VIINQGAEYF 
SSIGTESSKG TKIFSLVGKV NNTGLVEVPM GMPLRDIIFK IGGGVPNGKK FKAVQTGGPS 
GGCIPEEYLD VKVDFDELMK MGAMMGSGGM IVMDEDTCLV DIARYFLEFL SDESCGKCVP 
CREGIRQMLK VMTAITQGKG KEGDIELLEN MAMATQGAAL CALGKTAPNP VLSTLKYFRH 
EYEAHIKEKR CPALSCKELI AFHIDPAKCK GCGSCLRKCP ATAIEGGKKT IHVIDQEKCT 
KCGTCIEACP AAFGAIAKLS GVPVPEPPAP SARALA